RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ABATP80404 500 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 CDKL1Q00532 357 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 PRDX1Q06830 199 aaKnown RBP14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.095e-18■■■□□ 18.3
CSNK1E-210ENST00000442216 ZIC1Q15915 447 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 ZC3H12BQ5HYM0 836 aaKnown RBP14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 TEX35Q5T0J7 233 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 KIAA1614Q5VZ46 1190 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 PWWP2BQ6NUJ5 590 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 SBSNQ6UWP8 590 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 SPNS2Q8IVW8 549 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 CNPY4Q8N129 248 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 DNAJC22Q8N4W6 341 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 ESX1Q8N693 406 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 ATL1Q8WXF7 558 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 KLHL25Q9H0H3 589 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 PCBD2Q9H0N5 130 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 FAM60AQ9NP50 221 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 ENAMQ9NRM1 1142 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 UTP6Q9NYH9 597 aaKnown RBP14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 STOX2Q9P2F5 926 aaPredicted RBP14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 FREM2Q5SZK8 3169 aa14.47□□□□□ -0.09
CSNK1E-210ENST00000442216 SEC16AO15027 2179 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 FAM155BO75949 473 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 KIAA0754O94854 1291 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ITPKBP27987 946 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 PSMB5P28074 263 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 CRABP2P29373 138 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 SLC26A3P40879 764 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 GRIA3P42263 894 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ITGA1P56199 1179 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ATP6V0D1P61421 351 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 RELAQ04206 551 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ABHD18Q0P651 414 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ZNF460Q14592 562 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 PHKG1Q16816 387 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ICE2Q659A1 982 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 FCRL6Q6DN72 434 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 SUSD1Q6UWL2 747 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 C6orf15Q6UXA7 325 aaPredicted RBP14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ADAMTSL2Q86TH1 951 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 TMEM126BQ8IUX1 230 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 GPR135Q8IZ08 494 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 CACNA2D3Q8IZS8 1091 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ANKRD49Q8WVL7 239 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 SLC44A1Q8WWI5 657 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 N4BP2L2Q92802 583 aaPredicted RBP14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 UBXN10Q96LJ8 280 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 LRFN5Q96NI6 719 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 CCNL2Q96S94 520 aaPredicted RBP14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 MIPEPQ99797 713 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 EFHD1Q9BUP0 239 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 TXLNGYQ9BZA5 131 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 CAB39LQ9H9S4 337 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 MRPS30Q9NP92 439 aaKnown RBP14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 CCDC177Q9NQR7 707 aaPredicted RBP14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 ARL15Q9NXU5 204 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 CTNNAL1Q9UBT7 734 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 PLCL2Q9UPR0 1127 aa14.46□□□□□ -0.09
CSNK1E-210ENST00000442216 OR2A25A4D2G3 310 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 E7EQ34 232 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 H3BMH7 237 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 CPNE3O75131 537 aaKnown RBP14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 SCRG1O75711 98 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 SLU7O95391 586 aaKnown RBP14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 TIAF1O95411 115 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 HBQ1P09105 142 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 CCDC166P0CW27 439 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 ZNF28P17035 718 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 HRH2P25021 359 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 CNTFP26441 200 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 SERPINB9P50453 376 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 PMS2P54278 862 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 TMPRSS3P57727 454 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 TGIF1Q15583 401 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 PPP1R3AQ16821 1122 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 MANEAQ5SRI9 462 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 TLDC1Q6P9B6 456 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 AGTRAPQ6RW13 159 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 TIPARPQ7Z3E1 657 aaKnown RBP14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 FAM20CQ8IXL6 584 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 IL22RA1Q8N6P7 574 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 PPFIBP2Q8ND30 876 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 OR1L3Q8NH93 324 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 SNRNP27Q8WVK2 155 aaKnown RBP14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 HNRNPLLQ8WVV9 542 aaKnown RBP14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 FBXL8Q96CD0 374 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 FAM117AQ9C073 453 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 TAC3Q9UHF0 121 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 ZNF180Q9UJW8 692 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 OARD1Q9Y530 152 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 IKBKGQ9Y6K9 419 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 AP1M2Q9Y6Q5 423 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 ASPMQ8IZT6 3477 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 EPG5Q9HCE0 2579 aa14.45□□□□□ -0.1
CSNK1E-210ENST00000442216 PTPRQQ9UMZ3 2332 aa14.44□□□□□ -0.1
CSNK1E-210ENST00000442216 WDFY3Q8IZQ1 3526 aa14.44□□□□□ -0.1
CSNK1E-210ENST00000442216 CCDC189A1A4V9 331 aa14.44□□□□□ -0.1
CSNK1E-210ENST00000442216 CDC7O00311 574 aa14.44□□□□□ -0.1
CSNK1E-210ENST00000442216 PHGDHO43175 533 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms