RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 COCHO43405 550 aa17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 TYMPP19971 482 aa17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 ITGALP20701 1170 aa17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 AZGP1P25311 298 aaKnown RBP17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 USP39Q53GS9 565 aaKnown RBP17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 OR8J3Q8NGG0 315 aa17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 REEP1Q9H902 201 aa17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 ZNF639Q9UID6 485 aa17.79■□□□□ 0.44
PTPRJ-202ENST00000440289 MICAL3Q7RTP6 2002 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 TMEM221A6NGB7 291 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 DRGXA6NNA5 263 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 SAP18O00422 153 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 FPGTO14772 594 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 SPOUT1Q5T280 376 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 ADNP2Q6IQ32 1131 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 BEND5Q7L4P6 421 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 ZBTB2Q8N680 514 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 GOLM1Q8NBJ4 401 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 PPP1R14BQ96C90 147 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 HSH2DQ96JZ2 352 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 SH3GL1Q99961 368 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 RNF38Q9H0F5 515 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 DDX28Q9NUL7 540 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 C14orf119Q9NWQ9 140 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 OGDHLQ9ULD0 1010 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 HTR3EA5X5Y0 456 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 SLC38A8A6NNN8 435 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 AQP9O43315 295 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 DUSP11O75319 330 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 SCELO95171 688 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 KRT6AP02538 564 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 KRT6BP04259 564 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 PBLDP30039 288 aaPredicted RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 KRT20P35900 424 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 KRT6CP48668 564 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 CACNG1Q06432 222 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 OR2T5Q6IEZ7 315 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 MRPL10Q7Z7H8 261 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 GALNT7Q86SF2 657 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 FAM217AQ8IXS0 508 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 NLGN4XQ8N0W4 816 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 OR2T29Q8NH02 315 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 WFDC5Q8TCV5 224 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 C8orf48Q96LL4 319 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 ZNF641Q96N77 438 aaPredicted RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 KCNS3Q9BQ31 491 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 CD244Q9BZW8 370 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 WDR12Q9GZL7 423 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 TPK1Q9H3S4 243 aa17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 OLA1Q9NTK5 396 aaKnown RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 GPC6Q9Y625 555 aaPredicted RBP17.78■□□□□ 0.44
PTPRJ-202ENST00000440289 CCND3P30281 292 aaPredicted RBP17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 CSKP41240 450 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 DMPKQ09013 629 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 RUNDC3AQ59EK9 446 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 TRIB2Q92519 343 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 Q96MT0 163 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 C8orf4Q9NR00 106 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 RHCGQ9UBD6 479 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 A0A0C4DFX4 3053 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 CLIC1O00299 241 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 AIREO43918 545 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 ZNF623O75123 536 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 JRKO75564 520 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 ATF6P18850 670 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 DGKAP23743 735 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 SMAD3P84022 425 aaKnown RBP17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 TUBA3CQ13748 450 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 CPZQ66K79 652 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 UBE2R2Q712K3 238 aaPredicted RBP17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 GATAD2AQ86YP4 633 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 HIPK1Q86Z02 1210 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 SH3KBP1Q96B97 665 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 MYO19Q96H55 970 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 TMEM121BQ9BXQ6 578 aaPredicted RBP17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 USE1Q9NZ43 259 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 LRFN2Q9ULH4 789 aa17.77■□□□□ 0.44
PTPRJ-202ENST00000440289 TRIM64A6NGJ6 449 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 CLDN9O95484 217 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 ALDH2P05091 517 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 IL6P05231 212 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 ACPPP15309 386 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 FLT3LGP49771 235 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 RPP38P78345 283 aaKnown RBP17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 PTCHD3Q3KNS1 767 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 PRSS36Q5K4E3 855 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 ANKRD13BQ86YJ7 626 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 SVOPLQ8N434 492 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 GTPBP3Q969Y2 492 aaKnown RBP17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 COPS4Q9BT78 406 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 IL26Q9NPH9 171 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 THUMPD1Q9NXG2 353 aaKnown RBP17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 MBD1Q9UIS9 605 aaPredicted RBP17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 PPT2Q9UMR5 302 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 NEUROG3Q9Y4Z2 214 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 PMF1-BGLAPU3KQ54 211 aa17.77■□□□□ 0.43
PTPRJ-202ENST00000440289 OR2AG2A6NM03 316 aa17.76■□□□□ 0.43
PTPRJ-202ENST00000440289 KDELR3O43731 214 aa17.76■□□□□ 0.43
PTPRJ-202ENST00000440289 FABP3P05413 133 aa17.76■□□□□ 0.43
PTPRJ-202ENST00000440289 HIST1H2AGP0C0S8 130 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms