RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ACSL6Q9UKU0 697 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 RARRES3Q9UL19 164 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 PTPRQQ9UMZ3 2332 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 FER1L5A0AVI2 2057 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 CCDC88CQ9P219 2028 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 SRRM3A6NNA2 597 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 ZZEF1O43149 2961 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 MAP3K7O43318 606 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 INHBAP08476 426 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 ABHD2P08910 425 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 RPA3P35244 121 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 MSH2P43246 934 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 VSNL1P62760 191 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 FIGLAQ6QHK4 219 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 SBSNQ6UWP8 590 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 CDHR3Q6ZTQ4 885 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 OR2L3Q8NG85 312 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 KCNE4Q8WWG9 221 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 ANKRD7Q92527 254 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 ZNF501Q96CX3 271 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 TCTN2Q96GX1 697 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 TRIM54Q9BYV2 358 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 DERL2Q9GZP9 239 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 ATG10Q9H0Y0 220 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 EPB41L4BQ9H329 900 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 ARL15Q9NXU5 204 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 UTP6Q9NYH9 597 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 IKBKGQ9Y6K9 419 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 PKD1L2Q7Z442 2459 aa18.75■□□□□ 0.59
SEMA3B-206ENST00000439487 DSPP15924 2871 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 PABPN1LA6NDY0 278 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 TMEM150CB9EJG8 249 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 HCRTR1O43613 425 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 TIAF1O95411 115 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 GUCA1CO95843 209 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 SLC35E2BP0CK96 405 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 ZNF28P17035 718 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 CD82P27701 267 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 CRABP2P29373 138 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 GRIA3P42263 894 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 CSHL1Q14406 222 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 SLC29A2Q14542 456 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 TGIF1Q15583 401 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 TSNQ15631 228 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 DEFB110Q30KQ9 67 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 FCRL6Q6DN72 434 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 CYB5D1Q6P9G0 228 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 AGTRAPQ6RW13 159 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 DCAKDQ8WVC6 231 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 INTS7Q9NVH2 962 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 WDR70Q9NW82 654 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 TAC3Q9UHF0 121 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 NOVA2Q9UNW9 492 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 LAMA5O15230 3695 aa18.74■□□□□ 0.59
SEMA3B-206ENST00000439487 ATRXP46100 2492 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 EXOC1LA0A1B0GW35 172 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 STMND1H3BQB6 276 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 RRP8O43159 456 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 FKBP9O95302 570 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 ENO2P09104 434 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 LIPCP11150 499 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 CD1DP15813 335 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 CMPK1P30085 196 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 GABRA4P48169 554 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 AP1S2P56377 157 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 DLG1Q12959 904 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 CLN3Q13286 438 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 PPP1R3AQ16821 1122 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 THEMIS2Q5TEJ8 643 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 PWWP2BQ6NUJ5 590 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 BPHLQ86WA6 291 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 DNAJC22Q8N4W6 341 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 OR1L3Q8NH93 324 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 ALKBH8Q96BT7 664 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 MED8Q96G25 268 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 UBXN10Q96LJ8 280 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 SPRY4Q9C004 299 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 CHRNA10Q9GZZ6 450 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 FANCEQ9HB96 536 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 MRPS30Q9NP92 439 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 SNX15Q9NRS6 342 aa18.73■□□□□ 0.59
SEMA3B-206ENST00000439487 TEX51A0A1B0GUA7 166 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 KLK10O43240 276 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 STK17BO94768 372 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 KIAA0754O94854 1291 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 ITPKBP27987 946 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 GCAP28676 217 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 SERPINB9P50453 376 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 ATP6V0D1P61421 351 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 TBPL1P62380 186 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 NAE1Q13564 534 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 ERCC6LQ2NKX8 1250 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 ZXDCQ2QGD7 858 aaPredicted RBP18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 PRAMEF17Q5VTA0 474 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 ICE2Q659A1 982 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 LRRC69Q6ZNQ3 347 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 TIPARPQ7Z3E1 657 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 DTX1Q86Y01 620 aa18.72■□□□□ 0.59
SEMA3B-206ENST00000439487 UBLCP1Q8WVY7 318 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms