RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PATE4P0C8F1 98 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 HAPLN1P10915 354 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 HSPA8P11142 646 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 JAK1P23458 1154 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 MNDAP41218 407 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 LHX1P48742 406 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 LIMK1P53667 647 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 KRT83P78385 493 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 ODF4Q2M2E3 257 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 ITPRIPL2Q3MIP1 535 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 OTUD3Q5T2D3 398 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 ARHGAP17Q68EM7 881 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 MOXD1Q6UVY6 613 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 C11orf57Q6ZUT1 292 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 NUP54Q7Z3B4 507 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 SPATA19Q7Z5L4 167 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 TMEM139Q8IV31 216 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 ANKRD13CQ8N6S4 541 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 PHLDA1Q8WV24 401 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 GIMAP5Q96F15 307 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 THOC1Q96FV9 657 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 LRRC3BQ96PB8 259 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 RAD9AQ99638 391 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 GPATCH1Q9BRR8 931 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 FSD1Q9BTV5 496 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 FN3KQ9H479 309 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 CACNG4Q9UBN1 327 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 DAPK2Q9UIK4 370 aa3.32□□□□□ -1.88
TRAPPC13-204ENST00000438419 STK36Q9NRP7 1315 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 HTR3EA5X5Y0 456 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM86B1E9PN63 330 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 H0YAE9 185 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 CCDC188H7C350 402 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 SLC7A4O43246 635 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 SOCS5O75159 536 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 PAK4O96013 591 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM86B2P0C5J1 330 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM58BPP0C7Q3 252 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 SP100P23497 879 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ACAT1P24752 427 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 CDC25CP30307 473 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ALDH3A2P51648 485 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 UBASH3AP57075 661 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 HERV-K104P61576 105 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 CUL3Q13618 768 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ITGA7Q13683 1181 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 TUBB2AQ13885 445 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 VEZF1Q14119 521 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 P2RY6Q15077 328 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 CA9Q16790 459 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 C6orf136Q5SQH8 315 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ARHGEF16Q5VV41 709 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM91A1Q658Y4 838 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM53AQ6NSI3 398 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 C15orf39Q6ZRI6 1047 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ABI3BPQ7Z7G0 1075 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 KLHL7Q8IXQ5 586 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 MAPKAPK5-AS1Q8N8E1 139 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 OLIG1Q8TAK6 271 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 GDAP1Q8TB36 358 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 TMEM190Q8WZ59 177 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 URM1Q9BTM9 101 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 TUBB2BQ9BVA1 445 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 PITPNM3Q9BZ71 974 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF696Q9H7X3 374 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 COPS7BQ9H9Q2 264 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 CDH20Q9HBT6 801 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ARGLU1Q9NWB6 273 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 DDX43Q9NXZ2 648 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 SNX7Q9UNH6 387 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 KCNK7Q9Y2U2 307 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 TMED3Q9Y3Q3 217 aa3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZFP37Q9Y6Q3 630 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-204ENST00000438419 ENO4A6NNW6 628 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 HHLA1C9JL84 531 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 SLCO1B7G3V0H7 640 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF197O14709 1029 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 MOCS3O95396 460 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 NADKO95544 446 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 VIMP08670 466 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM157CP0CG43 387 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 IGHV4-31P0DP07 118 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 SAGP10523 405 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 TCF4P15884 667 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 NR0B1P51843 470 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 MAZP56270 477 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 B3GALT5-AS1P59052 145 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 CDR2Q01850 454 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 YWHAHQ04917 246 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF415Q09FC8 603 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 NFE2L1Q14494 772 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 RRS1Q15050 365 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 E2F5Q15329 346 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 TMEM30BQ3MIR4 351 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 GTDC1Q4AE62 458 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 MCMDC2Q4G0Z9 681 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 PHLDA2Q53GA4 152 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZRANB3Q5FWF4 1079 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 NHSL2Q5HYW2 709 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms