RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 POLR2FP61218 127 aaKnown RBP11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TUBA3CQ13748 450 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 KEAP1Q14145 624 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NOMO1Q15155 1222 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PPP2R5EQ16537 467 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PCSK7Q16549 785 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TUBA3EQ6PEY2 450 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 RIPOR1Q6ZS17 1223 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NLRP9Q7RTR0 991 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TMTC1Q8IUR5 882 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 MCATQ8IVS2 390 aaKnown RBP11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 BEST3Q8N1M1 668 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CNTD1Q8N815 330 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 FAM57AQ8TBR7 257 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 RND1Q92730 232 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 MIEF2Q96C03 454 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 SCMH1Q96GD3 660 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PCDH18Q9HCL0 1135 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 AMACRQ9UHK6 382 aa11.68□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ANK2Q01484 3957 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 A0A1B0GTH9 108 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 A8MUI8 341 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PES1O00541 588 aaKnown RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GAPDHSO14556 408 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 FFAR3O14843 346 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GPR42O15529 346 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 BUD23O43709 281 aaKnown RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CHRM5P08912 532 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TPBGLP0DKB5 382 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 RARAP10276 462 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 MSH3P20585 1137 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 EEF1DP29692 281 aaKnown RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PDHA2P29803 388 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PEBP1P30086 187 aaKnown RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 AKT1P31749 480 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PTGS2P35354 604 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CD96P40200 585 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NUP107P57740 925 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NKX6-1P78426 367 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 FANCCQ00597 558 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PMPCAQ10713 525 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 LONRF2Q1L5Z9 754 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TMEM211Q6ICI0 200 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TIGD7Q6NT04 549 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 SARM1Q6SZW1 724 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ARSKQ6UWY0 536 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GALNTL5Q7Z4T8 443 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 VWA5B2Q8N398 1253 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 HPS1Q92902 700 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CCM2Q9BSQ5 444 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 XPO4Q9C0E2 1151 aaKnown RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 OR52A5Q9H2C5 316 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CRIM1Q9NZV1 1036 aa11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 STOX2Q9P2F5 926 aaPredicted RBP11.67□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 A0A1W2PQ72 361 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 KCNK1O00180 336 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 MAN1A2O60476 641 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CD48P09326 243 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 MAGP20916 626 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CCNCP24863 283 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GRIA3P42263 894 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ZBTB17Q13105 803 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 FASTKQ14296 549 aaKnown RBP11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 OR1C1Q15619 314 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NCBP2-AS2Q69YL0 99 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 KDELC1Q6UW63 502 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 LINC00615Q96LM1 132 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TSGA13Q96PP4 275 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CEP41Q9BYV8 373 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NEUROD4Q9HD90 331 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PARVAQ9NVD7 372 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 RIC8BQ9NVN3 520 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TRPS1Q9UHF7 1281 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 DMGDHQ9UI17 866 aaKnown RBP11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GNPTGQ9UJJ9 305 aa11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 SONP18583 2426 aaKnown RBP11.66□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GLYATL1P3A0A0U1RQE8 302 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 A6NHS1 94 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 A6NNC1 897 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 TMCO5BA8MYB1 307 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 IDSB3KWA1 339 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 CXCR2P25025 360 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 HMGCLP35914 325 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 KIR2DL3P43628 341 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NR0B1P51843 470 aaKnown RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 EFNA3P52797 238 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 EMP2P54851 167 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 OCA2Q04671 838 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 BOP1Q14137 746 aaKnown RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PTPRCAPQ14761 206 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 IFI16Q16666 785 aaKnown RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 BCL7AQ4VC05 210 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 C16orf47Q6ZP98 133 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 LIX1LQ8IVB5 337 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ELOA2Q8IYF1 753 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 LINC00528Q8N1L1 170 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms