RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 LIASO43766 372 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 SRPX2O60687 465 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 FTCDO95954 541 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 HPP00738 406 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 STSP08842 583 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 RPS3P23396 243 aaKnown RBP eCLIP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 ARNTP27540 789 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 PSMB5P28074 263 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 SOX11P35716 441 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 OR1D4P47884 311 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 TDGF1P3P51864 188 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 PRAMEP78395 509 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 MFAP5Q13361 173 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 SF1Q15637 639 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 ZRSR2Q15696 482 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 FASTKD1Q53R41 847 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 AARS2Q5JTZ9 985 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 ATG9BQ674R7 924 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 FRMPD2BQ6IN97 320 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 RPUSD3Q6P087 351 aaKnown RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 PRMT9Q6P2P2 845 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 SHISA6Q6ZSJ9 500 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 LDB1Q86U70 411 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 SYCE1Q8N0S2 351 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 KRT222Q8N1A0 295 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 MPP5Q8N3R9 675 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 ARHGEF39Q8N4T4 335 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 C2orf73Q8N5S3 287 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 METTL27Q8N6F8 245 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 TTC29Q8NA56 475 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 OR2A1Q8NGT9 310 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 PSMF1Q92530 271 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 ZUFSPQ96AP4 578 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 RAD51AP1Q96B01 352 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 MRFAP1L1Q96HT8 127 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 C10orf90Q96M02 699 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 FRMD8P1Q9BZ68 369 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 EPS8L2Q9H6S3 715 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 NFS1Q9Y697 457 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 CAPN6Q9Y6Q1 641 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 FAM169AQ9Y6X4 670 aa10.46□□□□□ -0.73
SPTLC1P4-201ENST00000435997 SNRNP200O75643 2136 aaKnown RBP10.46□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CSMD2Q7Z408 3487 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 LOC105369274A0A096LPK9 316 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 LOC102723532A0A0G2JNH3 316 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 HYKKA2RU49 373 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 LRRTM2O43300 516 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 GAS8O95995 478 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 COX6A1P12074 109 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 ACPPP15309 386 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 TNFRSF8P28908 595 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 ATP5DP30049 168 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PPARGP37231 505 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 BDKRB1P46663 353 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 TTPAP49638 278 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 ZNF75DP51815 510 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 EMP3P54852 163 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 VSX2P58304 361 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 KLC1Q07866 573 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CDC16Q13042 620 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 TMED2Q15363 201 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 INAQ16352 499 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 RBBP7Q16576 425 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PRTGQ2VWP7 1150 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 FAM214AQ32MH5 1076 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CCSMST1Q4G0I0 132 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CTSL3PQ5NE16 218 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 WASHC2DQ5SRD0 308 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 IRAK1BP1Q5VVH5 260 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 ISLR2Q6UXK2 745 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PPP1R21Q6ZMI0 780 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PRUNE1Q86TP1 453 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PARP9Q8IXQ6 854 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 OR4N4Q8N0Y3 316 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 SLC34A3Q8N130 599 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 OR6P1Q8NGX9 317 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CFAP61Q8NHU2 1237 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 DNAJB14Q8TBM8 379 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 STT3BQ8TCJ2 826 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 THOC3Q96J01 351 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PANX3Q96QZ0 392 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 LMF1Q96S06 567 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CRB3Q9BUF7 120 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 SYNPO2LQ9H987 977 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 EIF2B3Q9NR50 452 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CATSPERZQ9NTU4 200 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 SPATA7Q9P0W8 599 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 SLC39A10Q9ULF5 831 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 ENTPD4Q9Y227 616 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 RUVBL2Q9Y230 463 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 MAU2Q9Y6X3 613 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PRRC2CQ9Y520 2896 aaKnown RBP10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 CROCCQ5TZA2 2017 aa10.45□□□□□ -0.74
SPTLC1P4-201ENST00000435997 IGKV1-8A0A0C4DH67 115 aa10.44□□□□□ -0.74
SPTLC1P4-201ENST00000435997 PCDH17O14917 1159 aa10.44□□□□□ -0.74
SPTLC1P4-201ENST00000435997 KLHL18O94889 574 aa10.44□□□□□ -0.74
SPTLC1P4-201ENST00000435997 MATN4O95460 622 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms