RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RETSATQ6NUM9 610 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 PRR23CQ6ZRP0 262 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 ZC3H7AQ8IWR0 971 aaKnown RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CLIP4Q8N3C7 705 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 OR13F1Q8NGS4 319 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CSF3RQ99062 836 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 BEGAINQ9BUH8 593 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 HTATIP2Q9BUP3 242 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 LHPPQ9H008 270 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 HMX1Q9NP08 348 aaPredicted RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 C1orf109Q9NX04 203 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 GPRC5BQ9NZH0 403 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 TMPRSS11EQ9UL52 423 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 UNC80Q8N2C7 3258 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 ZNF701M0R085 212 aaPredicted RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SLC28A1O00337 649 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 IFRD1O00458 451 aaPredicted RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CREG1O75629 220 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SERPINA1P01009 418 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 DDX5P17844 614 aaKnown RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 GZMMP51124 257 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 DNASE1L3Q13609 305 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 NDUFA5Q16718 116 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CACHD1Q5VU97 1274 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 NEK5Q6P3R8 708 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SERPINA13PQ6UXR4 307 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 GAREM2Q75VX8 874 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SNX29P2Q8IUI4 249 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 PLPP6Q8IY26 295 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CHPFQ8IZ52 775 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SLC15A4Q8N697 577 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 UGT2B28Q9BY64 529 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 DNAJB9Q9UBS3 223 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 TRPS1Q9UHF7 1281 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 ERVK-11Q9UQG0 969 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 BCL10O95999 233 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 ALDH1A1P00352 501 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 SOD2P04179 222 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 IL6P05231 212 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 PTSQ03393 145 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 OCA2Q04671 838 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CBX2Q14781 532 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 VEPH1Q14D04 833 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 SPOUT1Q5T280 376 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 THAP5Q7Z6K1 395 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 MICU2Q8IYU8 434 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 LEMD2Q8NC56 503 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CHDHQ8NE62 594 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 TBC1D15Q8TC07 691 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 UBTD2Q8WUN7 234 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 SKA2Q8WVK7 121 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 SELENOMQ8WWX9 145 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 APIPQ96GX9 242 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 DDX28Q9NUL7 540 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 AGAP14A8MT82 685 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 GNGT2O14610 69 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CLDN9O95484 217 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 MLLT10P55197 1068 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 RPS14P62263 151 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CD47Q08722 323 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 DPY19L1Q2PZI1 675 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 PLEKHG6Q3KR16 790 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 FAM209AQ5JX71 171 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 ACDQ96AP0 544 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CPPED1Q9BRF8 314 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 DCAF13Q9NV06 445 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 FAM8A1Q9UBU6 413 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 INSL5Q9Y5Q6 135 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 HS6ST1O60243 411 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 MITFO75030 526 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CKMP06732 381 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 DCTP40126 519 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 SF1Q15637 639 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 BCL2A1Q16548 175 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CES5AQ6NT32 575 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CMTM8Q8IZV2 173 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 SPARTQ8N0X7 666 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 ZNF420Q8TAQ5 688 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 ATP13A3Q9H7F0 1226 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 PAK1IP1Q9NWT1 392 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 CFAP97Q9P2B7 532 aa10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 TMEFF2Q9UIK5 374 aaPredicted RBP10.13□□□□□ -0.79
CLSTN1-203ENST00000435891 PLXNB3Q9ULL4 1909 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ANXA5P08758 320 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 SRCP12931 536 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 SDC1P18827 310 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ITPKAP23677 461 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 FSHRP23945 695 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 GABRR2P28476 465 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 NR4A2P43354 598 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 NRIP1P48552 1158 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 RAB15P59190 212 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 NFATC3Q12968 1075 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 PTCHD3Q3KNS1 767 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ANKRD26P1Q6NSI1 321 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 UBE2R2Q712K3 238 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms