RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZNF566Q969W8 418 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 L3HYPDHQ96EM0 354 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF419Q96HQ0 510 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MCCC1Q96RQ3 725 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CDCP1Q9H5V8 836 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 RNF121Q9H920 327 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 NLKQ9UBE8 527 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 BEST1O76090 585 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 FGF4P08620 206 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 EVI2BP34910 448 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MAGEA11P43364 429 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ERVK-8P63133 956 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 RAD51Q06609 339 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 STRIP1Q5VSL9 837 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 IER5Q5VY09 327 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 METTL6Q8TCB7 284 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ASPNQ9BXN1 380 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ELOVL6Q9H5J4 265 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF556Q9HAH1 456 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 OR12D3Q9UGF7 316 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 KIR2DL3P43628 341 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 MLLT6P55198 1093 aaPredicted RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 CYP4F8P98187 520 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 RFTN2Q52LD8 501 aaPredicted RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 COQ5Q5HYK3 327 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 SPANXN4Q5MJ08 99 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 OTUD1Q5VV17 481 aaPredicted RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 TAGAPQ8N103 731 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 CERKQ8TCT0 537 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 WNT8BQ93098 351 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 PDLIM5Q96HC4 596 aaKnown RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 FDXACB1Q9BRP7 624 aaPredicted RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 TTLL2Q9BWV7 592 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 TEX12Q9BXU0 123 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 EIF2B4Q9UI10 523 aaKnown RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 AAR2Q9Y312 384 aaKnown RBP7.27□□□□□ -1.24
CPSF6-202ENST00000435070 PCDHGB2Q9Y5G2 931 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 KCNE2Q9Y6J6 123 aa7.27□□□□□ -1.24
CPSF6-202ENST00000435070 FFAR3O14843 346 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 GPR42O15529 346 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 MAFO75444 373 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 TSPAN19P0C672 248 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CD1DP15813 335 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 EIF2S3P41091 472 aaKnown RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 RHAGQ02094 409 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ST3GAL4Q11206 333 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 AP5B1Q2VPB7 878 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 KIAA1614Q5VZ46 1190 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ARSKQ6UWY0 536 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF598Q86UK7 904 aaKnown RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 STX12Q86Y82 276 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CNTN4Q8IWV2 1026 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ENTHD1Q8IYW4 607 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 C7orf57Q8NEG2 295 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ISG20Q96AZ6 181 aaKnown RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ASIC4Q96FT7 647 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 DIRAS2Q96HU8 199 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 SIRT5Q9NXA8 310 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ASB1Q9Y576 335 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 WWP2O00308 870 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 OR1I1O60431 355 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 TKTL1P51854 596 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 SMSP52788 366 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 WNT3AP56704 352 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 RPL38P63173 70 aaKnown RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 RUNX1T1Q06455 604 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 HSPA14Q0VDF9 509 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 PWP1Q13610 501 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 GALEQ14376 348 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF767PQ75MW2 155 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 GLOD4Q9HC38 313 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 GALNT9Q9HCQ5 603 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 EMC3Q9P0I2 261 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 RCOR3Q9P2K3 495 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF225Q9UK10 706 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ALG5Q9Y673 324 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 E9PAM4 449 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 RPS19P39019 145 aaKnown RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ATN1P54259 1190 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 EFCAB12Q6NXP0 572 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 VWA5B2Q8N398 1253 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 KRTCAP2Q8N6L1 136 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 TPD52L3Q96J77 140 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 EGFL8Q99944 293 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CCM2Q9BSQ5 444 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CCDC32Q9BV29 185 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ERVMER34-1Q9H9K5 563 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 SLC6A13Q9NSD5 602 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 NRAPQ86VF7 1730 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 PSIP1O75475 530 aaKnown RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 UGT2B17O75795 530 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ARIH2O95376 493 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 POU2F1P14859 743 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CENPAP49450 140 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 VEPH1Q14D04 833 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF79Q15937 498 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 KIAA0930Q6ICG6 404 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms