RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SLMAPQ14BN4 828 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 SF1Q15637 639 aaKnown RBP17.68■□□□□ 0.42
HLA-F-220ENST00000434407 PHKG1Q16816 387 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 FCRL6Q6DN72 434 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 FIGLAQ6QHK4 219 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 SBSNQ6UWP8 590 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 OR2L3Q8NG85 312 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 ANKRD49Q8WVL7 239 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 TSPAN17Q96FV3 270 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 ULBP3Q9BZM4 244 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 ENAMQ9NRM1 1142 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 INTS7Q9NVH2 962 aaKnown RBP17.68■□□□□ 0.42
HLA-F-220ENST00000434407 IKZF3Q9UKT9 509 aa17.68■□□□□ 0.42
HLA-F-220ENST00000434407 TMEM150CB9EJG8 249 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 HCRTR1O43613 425 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 RAD1O60671 282 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 KIAA0754O94854 1291 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 ENO2P09104 434 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-220ENST00000434407 GRIA3P42263 894 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 CSRP3P50461 194 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 UCNP55089 124 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 AP1S2P56377 157 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 USP10Q14694 798 aaKnown RBP17.67■□□□□ 0.42
HLA-F-220ENST00000434407 PPP1R3AQ16821 1122 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 SUSD1Q6UWL2 747 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 NLGN4XQ8N0W4 816 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 NLGN4YQ8NFZ3 816 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-220ENST00000434407 OR1L3Q8NH93 324 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 HNRNPLLQ8WVV9 542 aaKnown RBP17.67■□□□□ 0.42
HLA-F-220ENST00000434407 CCNL2Q96S94 520 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-220ENST00000434407 TXLNGYQ9BZA5 131 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 DERL2Q9GZP9 239 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 CAB39LQ9H9S4 337 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 FANCEQ9HB96 536 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 GPAMQ9HCL2 828 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 STOX2Q9P2F5 926 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-220ENST00000434407 PCDHB3Q9Y5E6 796 aa17.67■□□□□ 0.42
HLA-F-220ENST00000434407 HMX2A2RU54 273 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 EFSO43281 561 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 ACSL3O95573 720 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 SYF2O95926 243 aaKnown RBP17.66■□□□□ 0.42
HLA-F-220ENST00000434407 STMN1P16949 149 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 ATP1A2P50993 1020 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 SLC12A2P55011 1212 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 PRDX1Q06830 199 aaKnown RBP17.66■□□□□ 0.42
HLA-F-220ENST00000434407 ABHD18Q0P651 414 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 BROXQ5VW32 411 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 MBOAT1Q6ZNC8 495 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 SYTL1Q8IYJ3 562 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 CACNA2D3Q8IZS8 1091 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 SNRNP27Q8WVK2 155 aaKnown RBP17.66■□□□□ 0.42
HLA-F-220ENST00000434407 UBXN10Q96LJ8 280 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 MIPEPQ99797 713 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.66■□□□□ 0.42
HLA-F-220ENST00000434407 SERTAD3Q9UJW9 196 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 KLHL20Q9Y2M5 609 aa17.66■□□□□ 0.42
HLA-F-220ENST00000434407 IGKV1-8A0A0C4DH67 115 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 TEX51A0A1B0GUA7 166 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 OR2A25A4D2G3 310 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 CDC7O00311 574 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 ABHD2P08910 425 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 FAM153BP0C7A2 387 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 TNFRSF8P28908 595 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 RPA3P35244 121 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-220ENST00000434407 ITGA1P56199 1179 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 RAB10P61026 200 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 YBX1P67809 324 aaKnown RBP17.65■□□□□ 0.42
HLA-F-220ENST00000434407 NAA25Q14CX7 972 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 ZXDCQ2QGD7 858 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-220ENST00000434407 FAM153CQ494X1 144 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 TEX35Q5T0J7 233 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 C6orf15Q6UXA7 325 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-220ENST00000434407 TRMT10CQ7L0Y3 403 aaKnown RBP17.65■□□□□ 0.42
HLA-F-220ENST00000434407 ESX1Q8N693 406 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 PPFIBP2Q8ND30 876 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 SLC44A1Q8WWI5 657 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 LRFN5Q96NI6 719 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 ZNF285Q96NJ3 590 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 PRORYQ9H606 182 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 RRAGDQ9NQL2 400 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-220ENST00000434407 ANKMY1Q9P2S6 941 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 PLCL2Q9UPR0 1127 aa17.65■□□□□ 0.42
HLA-F-220ENST00000434407 CCDC88CQ9P219 2028 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 TERTO14746 1132 aaKnown RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 PHGDHO43175 533 aaKnown RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 CTSVO60911 334 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 CPNE3O75131 537 aaKnown RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 SCRG1O75711 98 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 MT-ND3P03897 115 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 HIST1H2AGP0C0S8 130 aaPredicted RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 HIST1H2ADP20671 130 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 CMPK1P30085 196 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 STAT5AP42229 794 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 ABATP80404 500 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 CDKL1Q00532 357 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 SRSF6Q13247 344 aaKnown RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 COL28A1Q2UY09 1125 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 ICE2Q659A1 982 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 ZNF425Q6IV72 752 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 C19orf48Q6RUI8 117 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms