RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 DND1Q8IYX4 353 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 FAM109AQ8N4B1 249 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SMG8Q8ND04 991 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SELENOMQ8WWX9 145 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SLC38A4Q969I6 547 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ELMO3Q96BJ8 720 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 COL21A1Q96P44 957 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HEPHQ9BQS7 1158 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NANSQ9NR45 359 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 COL4A4P53420 1690 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SH3PXD2BA1X283 911 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TMX2-CTNND1H3BSU7 103 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ARPC2O15144 300 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HTRA2O43464 458 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ARL6IP5O75915 188 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CBX6O95503 412 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 JUNBP17275 347 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 OXTRP30559 389 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GPX6P59796 221 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 LRRC14Q15048 493 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TOMM20Q15388 145 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PPM1LQ5SGD2 360 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GCNT6Q5T4J0 391 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 VASH1Q7L8A9 365 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 LPCAT1Q8NF37 534 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TFAP2CQ92754 450 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ABCB8Q9NUT2 735 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 MARCOQ9UEW3 520 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PDE10AQ9Y233 779 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 INVSQ9Y283 1065 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SH3GLB1Q9Y371 365 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 DHRS7Q9Y394 339 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PPIL1Q9Y3C6 166 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SNX10Q9Y5X0 201 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NAV2Q8IVL1 2488 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CCDC195A0A1B0GUA6 201 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF840PA6NDX5 716 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 WASH3PC4AMC7 463 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GLDCP23378 1020 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SLC9A3P48764 834 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 RPL6Q02878 288 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SIM2Q14190 667 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CSHL1Q14406 222 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CES5AQ6NT32 575 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 C16orf46Q6P387 395 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 LCTLQ6UWM7 567 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TFAP2DQ7Z6R9 452 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TMCO2Q7Z6W1 182 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SLC22A15Q8IZD6 547 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 DNASE1L2Q92874 299 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HGH1Q9BTY7 390 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 KAT8Q9H7Z6 458 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TRIM36Q9NQ86 728 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 MGAT4BQ9UQ53 548 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 MRPS23Q9Y3D9 190 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NOTCH3Q9UM47 2321 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CHD8Q9HCK8 2581 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 JUPP14923 745 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SP100P23497 879 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CSTF2P33240 577 aaKnown RBP eCLIP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HOXD12P35452 270 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 MTHFRP42898 656 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HTR3AP46098 478 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TMED10P49755 219 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ADAMTSL4Q6UY14 1074 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 EEPD1Q7L9B9 569 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 POMGNT2Q8NAT1 580 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SUSD6Q92537 303 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SYT17Q9BSW7 474 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CHRNA10Q9GZZ6 450 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CYP4F11Q9HBI6 524 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SUFUQ9UMX1 484 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 INSL5Q9Y5Q6 135 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CLDN24A6NM45 220 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 BCKDKO14874 412 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CLEC3AO75596 197 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 FYNP06241 537 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ERVK-10P10266 1014 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PAX7P23759 505 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TAS2R39P59534 338 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GTF2H2Q13888 395 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 DAG1Q14118 895 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 DLG2Q15700 870 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 UBAP2Q5T6F2 1119 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GTF2H2CQ6P1K8 395 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GJB7Q6PEY0 223 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 AMZ2Q86W34 360 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 FBXL6Q8N531 539 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 OR52E6Q96RD3 313 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CIPCQ9C0C6 399 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ETAA1Q9NY74 926 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HCN3Q9P1Z3 774 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CACFD1Q9UGQ2 172 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 RUVBL2Q9Y230 463 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 YIPF1Q9Y548 306 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 WDR87Q6ZQQ6 2873 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 DOCK8Q8NF50 2099 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PGRP06401 933 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms