RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ZNF878C9JN71 531 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SCDO00767 359 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SLC7A4O43246 635 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ZNF234Q14588 700 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 PRPF38BQ5VTL8 546 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 CCM2Q9BSQ5 444 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SMG9Q9H0W8 520 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 NPIPA5E9PKD4 350 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 TOR1BO14657 336 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 CDC40O60508 579 aaKnown RBP eCLIP15.05■□□□□ 0
PTPRF-206ENST00000429895 PGLSO95336 258 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 GPIP06744 558 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 C8orf89P0DMQ9 161 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 ZNF3P17036 446 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 ACSL1P33121 698 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 LYSMD3Q7Z3D4 306 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 MPP5Q8N3R9 675 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 DGCR14Q96DF8 476 aaKnown RBP15.05■□□□□ 0
PTPRF-206ENST00000429895 POLR2J3Q9H1A7 115 aaKnown RBP15.05■□□□□ 0
PTPRF-206ENST00000429895 TTYH1Q9H313 450 aaPredicted RBP15.05■□□□□ 0
PTPRF-206ENST00000429895 C8orf4Q9NR00 106 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 EURLQ9NYK6 297 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 NPIPA1Q9UND3 350 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 PDE10AQ9Y233 779 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 NPHS1O60500 1241 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 CSNK2A2P19784 350 aaPredicted RBP15.05■□□□□ 0
PTPRF-206ENST00000429895 XKP51811 444 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 GBX2P52951 348 aaPredicted RBP15.05■□□□□ 0
PTPRF-206ENST00000429895 CRB2Q5IJ48 1285 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 PAQR3Q6TCH7 311 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 METTL27Q8N6F8 245 aaPredicted RBP15.05■□□□□ 0
PTPRF-206ENST00000429895 TNFRSF25Q93038 417 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 ROPN1LQ96C74 230 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 TOR3AQ9H497 397 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 METTL7AQ9H8H3 244 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 ZDHHC3Q9NYG2 299 aa15.05■□□□□ 0
PTPRF-206ENST00000429895 GRXCR1A8MXD5 290 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 PEX12O00623 359 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 LDB2O43679 373 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 DNAJA2O60884 412 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 CSTF2P33240 577 aaKnown RBP eCLIP15.05■□□□□ -0
PTPRF-206ENST00000429895 JAM2P57087 298 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 SCN1BQ07699 218 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 TPGS2Q68CL5 300 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 CLEC20AQ6ZU45 233 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 CMTR2Q8IYT2 770 aaKnown RBP15.05■□□□□ -0
PTPRF-206ENST00000429895 ZNF347Q96SE7 839 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 TAS2R7Q9NYW3 318 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 FZD4Q9ULV1 537 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 KCNK6Q9Y257 313 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 CAPN14A8MX76 684 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 HAS3O00219 553 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 PRKCDQ05655 676 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 SOWAHAQ2M3V2 549 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 TYSND1Q2T9J0 566 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 TRMT10BQ6PF06 316 aaKnown RBP15.05■□□□□ -0
PTPRF-206ENST00000429895 LRRTM4Q86VH4 590 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 TTLQ8NG68 377 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 UTS2RQ9UKP6 389 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 L7N2F9 121 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 JUNP05412 331 aaKnown RBP15.05■□□□□ -0
PTPRF-206ENST00000429895 BCHEP06276 602 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 FCER2P06734 321 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 PTNP21246 168 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 CCND3P30281 292 aaPredicted RBP15.05■□□□□ -0
PTPRF-206ENST00000429895 VAMP2P63027 116 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 ADGRE1Q14246 886 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 KLHL22Q53GT1 634 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 BTBD1Q9H0C5 482 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 SDHAF3Q9NRP4 125 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 PARPBPQ9NWS1 579 aa15.05■□□□□ -0
PTPRF-206ENST00000429895 FABP12A6NFH5 140 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 E7EQ34 232 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CYP17A1P05093 508 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CHRNB2P17787 502 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 GRK5P34947 590 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 GHRHRQ02643 423 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CREB5Q02930 508 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 DNASE1L3Q13609 305 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CCINQ13939 588 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 LRP8Q14114 963 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 TEAD2Q15562 447 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 ZNF598Q86UK7 904 aaKnown RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 PNLDC1Q8NA58 520 aaKnown RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 CCDC120Q96HB5 630 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 TTYH2Q9BSA4 534 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 SMURF1Q9HCE7 757 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 FKBP14Q9NWM8 211 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 ARVCFO00192 962 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 MUSKO15146 869 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CA12O43570 354 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 DSTNP60981 165 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 SIRPB2Q5JXA9 342 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 OLFML1Q6UWY5 402 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 FOXRED2Q8IWF2 684 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 DMRTB1Q96MA1 342 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 MAFFQ9ULX9 164 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 GSTT2BP0CG30 244 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 TYRP1P17643 537 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms