RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MFSD12Q6NUT3 480 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 RGMBQ6NW40 437 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 BTNL8Q6UX41 500 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 ARHGAP22Q7Z5H3 698 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LCA5Q86VQ0 697 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 NR2C2APQ86WQ0 139 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 DZIP1Q86YF9 867 aaKnown RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 CLYBLQ8N0X4 340 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLC5A8Q8N695 610 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 BMPERQ8N8U9 685 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 TRIML1Q8N9V2 468 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SPATA22Q8NHS9 363 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LNX1Q8TBB1 728 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 URGCPQ8TCY9 931 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 DNASE2BQ8WZ79 361 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PRCCQ92733 491 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLAMF9Q96A28 289 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 CENPTQ96BT3 561 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 EPSTI1Q96J88 318 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SFXN2Q96NB2 322 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 KLHL5Q96PQ7 755 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PANX3Q96QZ0 392 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SEPHS2Q99611 448 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 MOV10L1Q9BXT6 1211 aaKnown RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 HSD3B7Q9H2F3 369 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SRD5A3Q9H8P0 318 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 HHATLQ9HCP6 504 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 KLHL1Q9NR64 748 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 DPP3Q9NY33 737 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 IL19Q9UHD0 177 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 TBK1Q9UHD2 729 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LEF1Q9UJU2 399 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PIN4Q9Y237 131 aaKnown RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 RPH3AQ9Y2J0 694 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 ATP6V0A2Q9Y487 856 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LOXL2Q9Y4K0 774 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PCDHAC2Q9Y5I4 1007 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PRAG1Q86YV5 1406 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 SPAG9O60271 1321 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 CGNL1Q0VF96 1302 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 C5orf60A6NFR6 353 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 TRIM64CA6NLI5 447 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 K7EPI3 171 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 TULP2O00295 520 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 TXNL1O43396 289 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 SMPD2O60906 423 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PGLSO95336 258 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PTBP3O95758 552 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GUCA1CO95843 209 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ALPPP05187 535 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ABHD2P08910 425 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 C8orf89P0DMQ9 161 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ALPPL2P10696 532 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 HAPLN1P10915 354 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 AMD1P17707 334 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 DGKAP23743 735 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 CTNNB1P35222 781 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PTGER4P35408 488 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GNL1P36915 607 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 TMPOP42166 694 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 RGS7P49802 495 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ASCL1P50553 236 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GPC3P51654 580 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 MAT1AQ00266 395 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PRKCZQ05513 592 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GFPT1Q06210 699 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PLA2G7Q13093 441 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 NR1D2Q14995 579 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 CDO1Q16878 200 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 WSCD2Q2TBF2 565 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF718Q3SXZ3 478 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ACCSLQ4AC99 568 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 MDH1BQ5I0G3 518 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GCNT6Q5T4J0 391 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 MCM10Q7L590 875 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 NRARPQ7Z6K4 114 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 RNF113BQ8IZP6 322 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ARHGAP24Q8N264 748 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 C1orf52Q8N6N3 182 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 AMER3Q8N944 861 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 POC1AQ8NBT0 407 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 CLEC1AQ8NC01 280 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZBTB44Q8NCP5 570 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 IPMKQ8NFU5 416 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 OLIG1Q8TAK6 271 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 THAP6Q8TBB0 222 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 SAP25Q8TEE9 199 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 DNAAF4Q8WXU2 420 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 SORCS1Q8WY21 1168 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 FAM46BQ96A09 425 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 MOB3AQ96BX8 217 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 SNRNP40Q96DI7 357 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 CDCA5Q96FF9 252 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 LMLNQ96KR4 655 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GDAP1L1Q96MZ0 367 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 QRFPRQ96P65 431 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 MTERF1Q99551 399 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 KRT23Q9C075 422 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 LSG1Q9H089 658 aaKnown RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ABCG8Q9H221 673 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms