RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RBBP7Q16576 425 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 TUBB8Q3ZCM7 444 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 AGAP7PQ5VUJ5 663 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 COX15Q7KZN9 410 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 LDB1Q86U70 411 aaPredicted RBP14.26□□□□□ -0.13
MSH5-208ENST00000429846 CUZD1Q86UP6 607 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 C2orf73Q8N5S3 287 aaPredicted RBP14.26□□□□□ -0.13
MSH5-208ENST00000429846 SKA2Q8WVK7 121 aaPredicted RBP14.26□□□□□ -0.13
MSH5-208ENST00000429846 C1orf54Q8WWF1 131 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 AGAP4Q96P64 663 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 EPS8L2Q9H6S3 715 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 SPATA7Q9P0W8 599 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
MSH5-208ENST00000429846 CIDEBQ9UHD4 219 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 ERRFI1Q9UJM3 462 aaPredicted RBP14.26□□□□□ -0.13
MSH5-208ENST00000429846 HS3ST3B1Q9Y662 390 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 POLEQ07864 2286 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 CNTRLQ7Z7A1 2325 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 A1L4Q6 167 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 PFDN6O15212 129 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 NDUFS3O75489 264 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 MCM3P25205 808 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 ATP5DP30049 168 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 GLRBP48167 497 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 CARSP49589 748 aaKnown RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 RNF187Q5TA31 235 aaPredicted RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 B3GNTL1Q67FW5 361 aaPredicted RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 HIST2H2BCQ6DN03 193 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 PRMT9Q6P2P2 845 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 DRICH1Q6PGQ1 229 aaPredicted RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 KIRREL2Q6UWL6 708 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 ST6GALNAC3Q8NDV1 305 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 OR2L3Q8NG85 312 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 LHPPQ9H008 270 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 BFARQ9NZS9 450 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 CTSFQ9UBX1 484 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 TTC7AQ9ULT0 858 aaPredicted RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 NOVA2Q9UNW9 492 aaKnown RBP14.25□□□□□ -0.13
MSH5-208ENST00000429846 ZKSCAN5Q9Y2L8 839 aa14.25□□□□□ -0.13
MSH5-208ENST00000429846 VSTM2BA6NLU5 285 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 H3BMM5 538 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 MASP2O00187 686 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 CTSVO60911 334 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 PHF2O75151 1096 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 ETS1P14921 441 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 CDC25BP30305 580 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 RPL22P35268 128 aaKnown RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 TSFMP43897 325 aaKnown RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 BDKRB1P46663 353 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 NPY2RP49146 381 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 EIF3BP55884 814 aaKnown RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 SESN2P58004 480 aaPredicted RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 VSX2P58304 361 aaPredicted RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 BASP1P80723 227 aaKnown RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 SNX1Q13596 522 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 CCNG2Q16589 344 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 ARMC3Q5W041 872 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 MRNIPQ6NTE8 343 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 RNF44Q7L0R7 432 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 PRUNE1Q86TP1 453 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 TMEM151BQ8IW70 566 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 OR11G2Q8NGC1 345 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 MIPEPQ99797 713 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 SOX17Q9H6I2 414 aaPredicted RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 ZNF304Q9HCX3 659 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 ZNF282Q9UDV7 671 aaPredicted RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 GUCA1BQ9UMX6 200 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 NFS1Q9Y697 457 aa14.24□□□□□ -0.13
MSH5-208ENST00000429846 MDC1Q14676 2089 aaKnown RBP14.24□□□□□ -0.13
MSH5-208ENST00000429846 HYKKA2RU49 373 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 OR2A25A4D2G3 310 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 GOLGA6L6A8MZA4 724 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 HPP00738 406 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 PSMB5P28074 263 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 OR1D4P47884 311 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 EMP3P54852 163 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 ADARP55265 1226 aaKnown RBP14.23□□□□□ -0.13
MSH5-208ENST00000429846 CDK16Q00536 496 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 OCA2Q04671 838 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 ZNF169Q14929 603 aaPredicted RBP14.23□□□□□ -0.13
MSH5-208ENST00000429846 TLR1Q15399 786 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 RPS6KA1Q15418 735 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 TYSND1Q2T9J0 566 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 MUM1Q2TAK8 710 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 WASHC2DQ5SRD0 308 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 CNSTQ6PJW8 725 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 SDCCAG8Q86SQ7 713 aaPredicted RBP14.23□□□□□ -0.13
MSH5-208ENST00000429846 OTUD6BQ8N6M0 293 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 OR2A1Q8NGT9 310 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 DNAJB14Q8TBM8 379 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.23□□□□□ -0.13
MSH5-208ENST00000429846 MAIP1Q8WWC4 291 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 BIRC8Q96P09 236 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 TCF12Q99081 682 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 ZFYVE21Q9BQ24 234 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 CRB3Q9BUF7 120 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 KIFC1Q9BW19 673 aa14.23□□□□□ -0.13
MSH5-208ENST00000429846 DRG1Q9Y295 367 aaKnown RBP14.23□□□□□ -0.13
MSH5-208ENST00000429846 NTNG1Q9Y2I2 539 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms