RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TRGV8A0A0C4DH27 118 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 FITM1A5D6W6 292 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 AKR1B15C9JRZ8 316 aaPredicted RBP17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZNF189O75820 626 aaPredicted RBP17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 TJP3O95049 919 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 METTL18O95568 372 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 SNRPB2P08579 225 aaKnown RBP17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 CCR7P32248 378 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 PTPN7P35236 360 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 WASHC2DQ5SRD0 308 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 GDF7Q7Z4P5 450 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 TAB3Q8N5C8 712 aaPredicted RBP17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 FAM71DQ8N9W8 422 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 STT3BQ8TCJ2 826 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZNF285Q96NJ3 590 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 TAAR6Q96RI8 345 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 TTC1Q99614 292 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 PCDHA3Q9Y5H8 950 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 FAM169AQ9Y6X4 670 aa17.49■□□□□ 0.39
UPK3BP1-201ENST00000428678 NSG1A0A0A6YYJ2 146 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 HYKKA2RU49 373 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 RASGRF2O14827 1237 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 CTSVO60911 334 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZGLP1P0C6A0 271 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 PRR35P0CG20 571 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 CETN2P41208 172 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 TNFSF10P50591 281 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 GRB7Q14451 532 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 INAQ16352 499 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 AADACL2Q6P093 401 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 UNC5DQ6UXZ4 953 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 SIRT6Q8N6T7 355 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 BRIX1Q8TDN6 353 aaKnown RBP17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 ASZ1Q8WWH4 475 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 HDAC10Q969S8 669 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 TSSK1BQ9BXA7 367 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZNF282Q9UDV7 671 aaPredicted RBP17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 PCDHA13Q9Y5I0 950 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 ITPR3Q14573 2671 aa17.48■□□□□ 0.39
UPK3BP1-201ENST00000428678 SRPX2O60687 465 aaPredicted RBP17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 UNC5CO95185 931 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 MED26O95402 600 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 GOT2P00505 430 aaKnown RBP17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 F10P00742 488 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 EIF2S1P05198 315 aaKnown RBP17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 APOA4P06727 396 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 PSMA3P25788 255 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 HTR1EP28566 365 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 PTGER4P35408 488 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 SOX11P35716 441 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 RWDD2BP57060 319 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 P3H1Q32P28 736 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 FRMPD2BQ6IN97 320 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 PRMT9Q6P2P2 845 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 CNSTQ6PJW8 725 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 AFTPHQ6ULP2 937 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 TMEM207Q6UWW9 146 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 MRGPRGQ86SM5 289 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 OR13J1Q8NGT2 312 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 LKAAEAR1Q8TD35 194 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZUFSPQ96AP4 578 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 CCDC120Q96HB5 630 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 LURAP1Q96LR2 239 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 MIPEPQ99797 713 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 ENAMQ9NRM1 1142 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 STOX2Q9P2F5 926 aaPredicted RBP17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZC3H7BQ9UGR2 993 aaKnown RBP17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZFHX3Q15911 3703 aa17.47■□□□□ 0.39
UPK3BP1-201ENST00000428678 A0A0J9YVX5 310 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 TARM1B6A8C7 271 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 CCL21O00585 134 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 PSMD3O43242 534 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 GPC4O75487 556 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 FKBP9O95302 570 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 PTMAP06454 111 aaKnown RBP17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 COX6B1P14854 86 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 FBLP22087 321 aaKnown RBP17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 PSMB5P28074 263 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 EEF1A2Q05639 463 aaKnown RBP17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 TMED2Q15363 201 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 ATG9BQ674R7 924 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 TTC23LQ6PF05 361 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 BNC2Q6ZN30 1099 aaPredicted RBP17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 NDUFAF7Q7L592 441 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZNF808Q8N4W9 903 aaPredicted RBP17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 OR52K1Q8NGK4 314 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 PSMF1Q92530 271 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 RAB11FIP5Q9BXF6 653 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 CHST11Q9NPF2 352 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 SH3BGRL2Q9UJC5 107 aa17.46■□□□□ 0.39
UPK3BP1-201ENST00000428678 LOC105369274A0A096LPK9 316 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 LOC102723532A0A0G2JNH3 316 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 GAS8O95995 478 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 SERPINA7P05543 415 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 ERVK-10P10266 1014 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 COX6A1P12074 109 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms