RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SNX6Q9UNH7 406 aa16.81■□□□□ 0.28
FN1-208ENST00000426059 EML2O95834 649 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 CAPN3P20807 821 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 DPP6P42658 865 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 CCR3P51677 355 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 DMPKQ09013 629 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 TBL3Q12788 808 aaKnown RBP16.8■□□□□ 0.28
FN1-208ENST00000426059 ART3Q13508 389 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 LRRC32Q14392 662 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 GSTA3Q16772 222 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 GGTA1PQ4G0N0 100 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 REP15Q6BDI9 236 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 Q6ZSR6 202 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 PARP9Q8IXQ6 854 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 DENND6BQ8NEG7 585 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 OR13H1Q8NG92 308 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 MAGEC3Q8TD91 643 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 VPS33AQ96AX1 596 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 XKR8Q9H6D3 395 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 RMI1Q9H9A7 625 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 EFCAB1Q9HAE3 211 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 PRM3Q9NNZ6 103 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 WSB2Q9NYS7 404 aaPredicted RBP16.8■□□□□ 0.28
FN1-208ENST00000426059 WNT16Q9UBV4 365 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 KCNE2Q9Y6J6 123 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 SLC28A1O00337 649 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 RSL1D1O76021 490 aaKnown RBP16.8■□□□□ 0.28
FN1-208ENST00000426059 GNAZP19086 355 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 KELP23276 732 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 IL12AP29459 219 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 AKT2P31751 481 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 STARD6P59095 220 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 KPNB1Q14974 876 aaKnown RBP16.8■□□□□ 0.28
FN1-208ENST00000426059 FRG2Q64ET8 278 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 PACS2Q86VP3 889 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 RNF148Q8N7C7 305 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 CCDC124Q96CT7 223 aaKnown RBP16.8■□□□□ 0.28
FN1-208ENST00000426059 WDR92Q96MX6 357 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 FRG2BQ96QU4 278 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 TMEM168Q9H0V1 697 aa16.8■□□□□ 0.28
FN1-208ENST00000426059 MRPS17Q9Y2R5 130 aaKnown RBP16.8■□□□□ 0.28
FN1-208ENST00000426059 MYO15AQ9UKN7 3530 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 ATP6V1G2O95670 118 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 PSMB5P28074 263 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 ZFP36L2P47974 494 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 ACADVLP49748 655 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 THOP1P52888 689 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 KIAA1024LP59773 190 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 EMX2Q04743 252 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 PTGR1Q14914 329 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 ZNF542PQ5EBM4 170 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 LIPJQ5W064 366 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 RETREG3Q86VR2 466 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 HPS6Q86YV9 775 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SYNPOQ8N3V7 929 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 TMEM145Q8NBT3 493 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SCARF2Q96GP6 870 aaPredicted RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 OR2M4Q96R27 311 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SLC39A3Q9BRY0 314 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SGPP1Q9BX95 441 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 MRPL1Q9BYD6 325 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 TRIT1Q9H3H1 467 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 IL1RL2Q9HB29 575 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 LRTM1Q9HBL6 345 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 CCDC177Q9NQR7 707 aaPredicted RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 TDRD6O60522 2096 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 GOLGA4Q13439 2230 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 SDK1Q7Z5N4 2213 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 TRBV23OR9-2A0A075B6M9 112 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 RASGRP1O95267 797 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 IDSP22304 550 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 HTR1BP28222 390 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 CD6P30203 668 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 MSX2P35548 267 aaPredicted RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 CTBSQ01459 385 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 PUS10Q3MIT2 529 aaKnown RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 KIAA0895LQ68EN5 471 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SLC30A9Q6PML9 568 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 CYP20A1Q6UW02 462 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SLCO4C1Q6ZQN7 724 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 KLHDC8AQ8IYD2 350 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SLC22A18ASQ8N1D0 253 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 CLHC1Q8NHS4 586 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 PROKR1Q8TCW9 393 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 JPH3Q8WXH2 748 aaPredicted RBP16.79■□□□□ 0.28
FN1-208ENST00000426059 PPP3R2Q96LZ3 170 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 MENTQ9BUN1 341 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SLC25A23Q9BV35 468 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 BRINP2Q9C0B6 783 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 SPNS1Q9H2V7 528 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 ACTL8Q9H568 366 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 WDR41Q9HAD4 459 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 TBC1D29Q9UFV1 150 aa16.79■□□□□ 0.28
FN1-208ENST00000426059 FANCMQ8IYD8 2048 aa16.78■□□□□ 0.28
FN1-208ENST00000426059 PRR19A6NJB7 356 aa16.78■□□□□ 0.28
FN1-208ENST00000426059 AXIN1O15169 862 aa16.78■□□□□ 0.28
FN1-208ENST00000426059 NRP2O60462 931 aa16.78■□□□□ 0.28
FN1-208ENST00000426059 SLC22A3O75751 556 aa16.78■□□□□ 0.28
FN1-208ENST00000426059 IGLV3-19P01714 112 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms