RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RAB11FIP5Q9BXF6 653 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 MLXIPLQ9NP71 852 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 SLC22A11Q9NSA0 550 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 TXLNGQ9NUQ3 528 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 SAMD15Q9P1V8 674 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 PLAAQ9Y263 795 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 PADI2Q9Y2J8 665 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 PTRH2Q9Y3E5 179 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 PCDHGA9Q9Y5G4 932 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 FAM237BA0A1B0GVD1 139 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 A0A1W2PPV9 198 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 A6NL46 340 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 CEACAM4O75871 244 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 PKMP14618 531 aaKnown RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 PAMP19021 973 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 CHRM3P20309 590 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 ADARP55265 1226 aaKnown RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 YBX1P67809 324 aaKnown RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 FASTKQ14296 549 aaKnown RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 MORF4L2Q15014 288 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 NADK2Q4G0N4 442 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 NKAIN1Q4KMZ8 207 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 HIBCHQ6NVY1 386 aaPredicted RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 MRGPREQ86SM8 312 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 RAB43Q86YS6 212 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 DENND6AQ8IWF6 608 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 FDCSPQ8NFU4 85 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 HMGCLL1Q8TB92 370 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 SIGLEC10Q96LC7 697 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 PWWP2AQ96N64 755 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 FOPNLQ96NB1 174 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 MIPEPQ99797 713 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 ERP44Q9BS26 406 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 NDC1Q9BTX1 674 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 NUDT9Q9BW91 350 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 DPH5Q9H2P9 285 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 FBXO6Q9NRD1 293 aaPredicted RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 INTS7Q9NVH2 962 aaKnown RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 IFT80Q9P2H3 777 aaPredicted RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 NDOR1Q9UHB4 597 aa14.57□□□□□ -0.08
USB1-202ENST00000423271 GPN3Q9UHW5 284 aaPredicted RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 RP1L1Q8IWN7 2480 aaPredicted RBP14.57□□□□□ -0.08
USB1-202ENST00000423271 ZCWPW2A0A1B0GU75 182 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 SDR42E2A6NKP2 422 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 ARHGEF33A8MVX0 844 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 H3BMM5 538 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 PFDN6O15212 129 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 TP73O15350 636 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 CTSVO60911 334 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 BANF1O75531 89 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 MATN4O95460 622 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 ALAS2P22557 587 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 ATP5DP30049 168 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 CCNFP41002 786 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 FOLR3P41439 243 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 CTBP1Q13363 440 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 RAPSNQ13702 412 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 MSS51Q4VC12 460 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 ARMC3Q5W041 872 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 DUPD1Q68J44 220 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 MRPL14Q6P1L8 145 aaKnown RBP14.56□□□□□ -0.08
USB1-202ENST00000423271 TTLL10Q6ZVT0 673 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 DTWD1Q8N5C7 304 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 OR2L3Q8NG85 312 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 OR2A1Q8NGT9 310 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 GIMAP7Q8NHV1 300 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 MIB2Q96AX9 1013 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 C17orf62Q9BQA9 187 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 INTS10Q9NVR2 710 aaKnown RBP14.56□□□□□ -0.08
USB1-202ENST00000423271 SPATA7Q9P0W8 599 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 MED16Q9Y2X0 877 aa14.56□□□□□ -0.08
USB1-202ENST00000423271 A0A1B0GX78 115 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 E5RI56 91 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 MASP2O00187 686 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 UMODP07911 640 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 SLC1A2P43004 574 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 CLCN7P51798 805 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 CUL1Q13616 776 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 CYP2A13Q16696 494 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 KLHL38Q2WGJ6 581 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 ZC3H12BQ5HYM0 836 aaKnown RBP14.55□□□□□ -0.08
USB1-202ENST00000423271 FRMPD2BQ6IN97 320 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 C8orf74Q6P047 294 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 ZNF549Q6P9A3 640 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 MED25Q71SY5 747 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 COX15Q7KZN9 410 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 PPP1R32Q7Z5V6 425 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 RAB42Q8N4Z0 105 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 METTL27Q8N6F8 245 aaPredicted RBP14.55□□□□□ -0.08
USB1-202ENST00000423271 TMEM102Q8N9M5 508 aaPredicted RBP14.55□□□□□ -0.08
USB1-202ENST00000423271 MNS1Q8NEH6 495 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 OR2Y1Q8NGV0 311 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.55□□□□□ -0.08
USB1-202ENST00000423271 DLG3Q92796 817 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 ZNF285Q96NJ3 590 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 SELENOSQ9BQE4 189 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 ACAT2Q9BWD1 397 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 CUTCQ9NTM9 273 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms