RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PIM3Q86V86 326 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 KLF16Q9BXK1 252 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 PNPOQ9NVS9 261 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 LCHNA4D1U4 455 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 LDB2O43679 373 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 MAFKO60675 156 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 B4GALT2O60909 372 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ECI2O75521 394 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ENPP2Q13822 863 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 DPYSQ14117 519 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 HSF5Q4G112 596 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 TOR1AIP1Q5JTV8 583 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 RPTNQ6XPR3 784 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ZDHHC14Q8IZN3 488 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 CPXM2Q8N436 756 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 GFM1Q96RP9 751 aaKnown RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF717Q9BY31 904 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 DERL2Q9GZP9 239 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 METTL7AQ9H8H3 244 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 DNMT3BQ9UBC3 853 aaKnown RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 CSNK2A2P19784 350 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 PTGIRP43119 386 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ADRM1Q16186 407 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ASTE1Q2TB18 679 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 PDSS1Q5T2R2 415 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 Q6ZSR6 202 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 EEF1AKMT1Q8WVE0 214 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SLC13A3Q8WWT9 602 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 TCEAL4Q96EI5 215 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SLCO3A1Q9UIG8 710 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 IKZF3Q9UKT9 509 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 HCN2Q9UL51 889 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SEC24AO95486 1093 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 KLK1P06870 262 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 HOXA9P31269 272 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SPINT3P49223 89 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 OAFQ86UD1 273 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 TRIM74Q86UV6 250 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 TDRPQ86YL5 185 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 UBE2ZQ9H832 354 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 MKL2Q9ULH7 1088 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 ATP6V1B1P15313 513 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 VSX2P58304 361 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 DECR1Q16698 335 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SLCO2A1Q92959 643 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 RTKNQ9BST9 563 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SLC40A1Q9NP59 571 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 C3orf18Q9UK00 162 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 PSME4Q14997 1843 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 GRK6P43250 576 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 OGDHQ02218 1023 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 GBX1Q14549 363 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 HERC3Q15034 1050 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 CLDN19Q8N6F1 224 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 OR2T12Q8NG77 320 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 OR4K17Q8NGC6 315 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SPPL3Q8TCT6 385 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 MAGEE2Q8TD90 523 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 PPM1MQ96MI6 270 aa10.47□□□□□ -0.73
PTCH1-206ENST00000421141 SPIN1Q9Y657 262 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-206ENST00000421141 G3V2T6 193 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 SDC3O75056 442 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 PER3P56645 1201 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 HNRNPA1L2Q32P51 320 aaKnown RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 NCEH1Q6PIU2 408 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 TMEM139Q8IV31 216 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 LENG8Q96PV6 779 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 SLC46A2Q9BY10 475 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 LYARQ9NX58 379 aaKnown RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 RARRES3Q9UL19 164 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 MTCL1Q9Y4B5 1905 aaKnown RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 PDCD11Q14690 1871 aaKnown RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 IRGMA1A4Y4 181 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 CAPN8A6NHC0 703 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 ARHGEF9O43307 516 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 ALOX5P09917 674 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 AQP1P29972 269 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 SLC7A2P52569 658 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 RPS15AP62244 130 aaKnown RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 ZBTB6Q15916 424 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 LRRN4CLQ8ND94 238 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 LMO3Q8TAP4 145 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 PLEKHG4BQ96PX9 1271 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 ELL3Q9HB65 397 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-206ENST00000421141 IL21RQ9HBE5 538 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 DNAJB1P25685 340 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 INAQ16352 499 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 KLHL12Q53G59 568 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 ADGRG6Q86SQ4 1221 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 DNAJB8Q8NHS0 232 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 HBEGFQ99075 208 aa10.46□□□□□ -0.73
PTCH1-206ENST00000421141 KCNC1P48547 511 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 WASHC2DQ5SRD0 308 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 AGTRAPQ6RW13 159 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 KCNC2Q96PR1 638 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 PHF7Q9BWX1 381 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-206ENST00000421141 PRPF19Q9UMS4 504 aaKnown RBP10.46□□□□□ -0.74
PTCH1-206ENST00000421141 CCDC88CQ9P219 2028 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 DHRS12A0PJE2 317 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 DLG1Q12959 904 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms