RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NUDT13Q86X67 352 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF548Q8NEK5 533 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 A0A1W2PRB8 838 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 DAPL1A0PJW8 107 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 PRORSD1PA6NEY8 169 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 TRIM64BA6NI03 449 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 PDCD5O14737 125 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 AXIN1O15169 862 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ATP1B2P14415 290 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 GBX2P52951 348 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 POF1BQ8WVV4 589 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CLEC4DQ8WXI8 215 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ESAMQ96AP7 390 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CDH22Q9UJ99 828 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 YIPF1Q9Y548 306 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ADGRB2O60241 1585 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 SH3D21A4FU49 640 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 RPS14P62263 151 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 RPL6Q02878 288 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 LPCAT4Q643R3 524 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CMTR2Q8IYT2 770 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF781Q8N8C0 355 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CLPTM1LQ96KA5 538 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 LYARQ9NX58 379 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 IFT52Q9Y366 437 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ITGA5P08648 1049 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 PRPF38BQ5VTL8 546 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 GFM1Q96RP9 751 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 TMEM175Q9BSA9 504 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 FGFBP2Q9BYJ0 223 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 SRRDQ9UH36 339 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 R3HDM2Q9Y2K5 976 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ILVBLA1L0T0 632 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 AGR2O95994 175 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ADH1BP00325 375 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 GSTT2BP0CG30 244 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 SCARB2Q14108 478 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CARTPTQ16568 116 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 KLHL26Q53HC5 615 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CWF19L1Q69YN2 538 aaKnown RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF662Q6ZS27 426 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 CPT1BQ92523 772 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 MR1Q95460 341 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-205ENST00000418258 ITM2CQ9NQX7 267 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 PFDN2Q9UHV9 154 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 PLAGL1Q9UM63 463 aa10.97□□□□□ -0.65
PTCH1-205ENST00000418258 SALL3Q9BXA9 1300 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 VIPR1P32241 457 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 IL22RA1Q8N6P7 574 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 DNAAF1Q8NEP3 725 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 NAT14Q8WUY8 206 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 TVP23BQ9NYZ1 205 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 C2CD4BA6NLJ0 364 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 CXCR6O00574 342 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 GXYLT1Q4G148 440 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 SPIN4Q56A73 249 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 AAGABQ6PD74 315 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 BORCS8Q96FH0 119 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 ADAD1Q96M93 576 aaKnown RBP10.96□□□□□ -0.65
PTCH1-205ENST00000418258 MED28Q9H204 178 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 SPATA7Q9P0W8 599 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 TAC3Q9UHF0 121 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 POU2F3Q9UKI9 436 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 ATRNO75882 1429 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 LDB2O43679 373 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 RFC2P35250 354 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 DECR1Q16698 335 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 KLHL22Q53GT1 634 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 C12orf40Q86WS4 652 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 CMTM8Q8IZV2 173 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 ZSCAN4Q8NAM6 433 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-205ENST00000418258 SUSD3Q96L08 255 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 VPS29Q9UBQ0 182 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.65
PTCH1-205ENST00000418258 ARL3P36405 182 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 MTPNP58546 118 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 CHRNA6Q15825 494 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 TNFAIP8L3Q5GJ75 292 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 SDR16C5Q8N3Y7 309 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 OXR1Q8N573 874 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 OR5AK3PQ8NH89 298 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 SPOCK2Q92563 424 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 LPGAT1Q92604 370 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM98Q9Y2Y6 226 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 SPIN1Q9Y657 262 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 COL14A1Q05707 1796 aaKnown RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 L7N2F9 121 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 NIPSNAP2O75323 286 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 DRD4P21917 467 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 VAMP2P63027 116 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 SIRPB2Q5JXA9 342 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 AKAP14Q86UN6 197 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 PGAM4Q8N0Y7 254 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 GLB1L3Q8NCI6 653 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 OR52E4Q8NGH9 312 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms