RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 IRAK4Q9NWZ3 460 aa14.48□□□□□ -0.09
UBXN4-203ENST00000416538 LUZP4Q9P127 313 aa14.48□□□□□ -0.09
UBXN4-203ENST00000416538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.48□□□□□ -0.09
UBXN4-203ENST00000416538 SLC39A10Q9ULF5 831 aa14.48□□□□□ -0.09
UBXN4-203ENST00000416538 PADI2Q9Y2J8 665 aa14.48□□□□□ -0.09
UBXN4-203ENST00000416538 JRKLQ9Y4A0 524 aa14.48□□□□□ -0.09
UBXN4-203ENST00000416538 USP9YO00507 2555 aaPredicted RBP14.48□□□□□ -0.09
UBXN4-203ENST00000416538 CPAMD8Q8IZJ3 1885 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 LOC105369274A0A096LPK9 316 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 IGKV1-8A0A0C4DH67 115 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 LOC102723532A0A0G2JNH3 316 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 A6NL46 340 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 PGRMC1O00264 195 aaKnown RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 KIF5CO60282 957 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 PHF2O75151 1096 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 ALOX12BO75342 701 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 BANF1O75531 89 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 MLNP12872 115 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 PKMP14618 531 aaKnown RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 FOLR3P41439 243 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 MPP1Q00013 466 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 CTBP1Q13363 440 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 CUL1Q13616 776 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 DHX34Q14147 1143 aaKnown RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 SF1Q15637 639 aaKnown RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 CYP2A13Q16696 494 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 KLHL38Q2WGJ6 581 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 TTLL10Q6ZVT0 673 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 RNF44Q7L0R7 432 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 RAB43Q86YS6 212 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 OR4N4Q8N0Y3 316 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 RBMXL3Q8N7X1 1067 aaKnown RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 PBKQ96KB5 322 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 SIGLEC10Q96LC7 697 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 OSBPL9Q96SU4 736 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 TCF12Q99081 682 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 SPSB2Q99619 263 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 NDC1Q9BTX1 674 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 ENAMQ9NRM1 1142 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 TXLNGQ9NUQ3 528 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 SPATA7Q9P0W8 599 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 STOX2Q9P2F5 926 aaPredicted RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 IFT80Q9P2H3 777 aaPredicted RBP14.47□□□□□ -0.09
UBXN4-203ENST00000416538 CTSFQ9UBX1 484 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 KLK4Q9Y5K2 254 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 MAST4O15021 2626 aa14.47□□□□□ -0.09
UBXN4-203ENST00000416538 SCN3AQ9NY46 2000 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 A0A1B0GX78 115 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 OR2A25A4D2G3 310 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 MYO1CO00159 1063 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 KPNA5O15131 536 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 PSIP1O75475 530 aaKnown RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 SNRPNP63162 240 aaKnown RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 RNASEH2BQ5TBB1 312 aaKnown RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 SUSD1Q6UWL2 747 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 MED25Q71SY5 747 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 SDCCAG8Q86SQ7 713 aaPredicted RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 TMEM102Q8N9M5 508 aaPredicted RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 SLC22A18Q96BI1 424 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 SMAD5Q99717 465 aaKnown RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 SELENOSQ9BQE4 189 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 ACAT2Q9BWD1 397 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 XAB2Q9HCS7 855 aaKnown RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 CUTCQ9NTM9 273 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 INTS10Q9NVR2 710 aaKnown RBP14.46□□□□□ -0.09
UBXN4-203ENST00000416538 NDOR1Q9UHB4 597 aa14.46□□□□□ -0.09
UBXN4-203ENST00000416538 A0A0J9YVX5 310 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 FITM1A5D6W6 292 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 SDR42E2A6NKP2 422 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 USP27XA6NNY8 438 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 DSCR3O14972 297 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 USP1O94782 785 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 ONECUT2O95948 504 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 CHRM3P20309 590 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 ALAS2P22557 587 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 CCNFP41002 786 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 OR1D4P47884 311 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 VSX2P58304 361 aaPredicted RBP14.45□□□□□ -0.1
UBXN4-203ENST00000416538 TIAL1Q01085 375 aaKnown RBP eCLIP14.45□□□□□ -0.1
UBXN4-203ENST00000416538 SSPNQ14714 243 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 DCAF10Q5QP82 559 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 ARMC3Q5W041 872 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 SLC6A19Q695T7 634 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 PPFIBP2Q8ND30 876 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 OR9A1PQ8NGU1 263 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 GSDMBQ8TAX9 411 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 CD200R1Q8TD46 325 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 ACTRT1Q8TDG2 376 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 C10orf90Q96M02 699 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 PKP4Q99569 1192 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 MFRPQ9BY79 579 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 DDX47Q9H0S4 455 aaKnown RBP14.45□□□□□ -0.1
UBXN4-203ENST00000416538 PLAC1Q9HBJ0 212 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 P4HTMQ9NXG6 502 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 GPR83Q9NYM4 423 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 SAMD15Q9P1V8 674 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 SLC17A6Q9P2U8 582 aa14.45□□□□□ -0.1
UBXN4-203ENST00000416538 GPN3Q9UHW5 284 aaPredicted RBP14.45□□□□□ -0.1
UBXN4-203ENST00000416538 H3BMM5 538 aa14.44□□□□□ -0.1
UBXN4-203ENST00000416538 FKBP9O95302 570 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms