RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HNRNPLLQ8WVV9 542 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 UFD1Q92890 307 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 BCO2Q9BYV7 579 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ANKZF1Q9H8Y5 726 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF221Q9UK13 617 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 WNT6Q9Y6F9 365 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 MAGEB17A8MXT2 336 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 PITPNM1O00562 1244 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 SDC3O75056 442 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 AP3S2P59780 193 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ADAM17P78536 824 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 GRK1Q15835 563 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 DACT2Q5SW24 774 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 RIOK2Q9BVS4 552 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 CLK4Q9HAZ1 481 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 C14orf166Q9Y224 244 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HK1P19367 917 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 MPIP34949 423 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HNF1BP35680 557 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 TLE2Q04725 743 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 LRRC58Q96CX6 371 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF701Q9NV72 531 aaPredicted RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 EPS8L1Q8TE68 723 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 IL4I1Q96RQ9 567 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 FBRSL1Q9HCM7 1045 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ALG5Q9Y673 324 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HOXB2P14652 356 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 VIPR1P32241 457 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 GNA12Q03113 381 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 MLC1Q15049 377 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 SLC25A52Q3SY17 297 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HMBOX1Q6NT76 420 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ARL9Q6T311 187 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 NPAS4Q8IUM7 802 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HIF1ANQ9NWT6 349 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 KDM6BO15054 1643 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HDAC3O15379 428 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 PPM1BO75688 479 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 OAZ1P54368 228 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 KCNC4Q03721 635 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 SLC35F1Q5T1Q4 408 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 RAB43Q86YS6 212 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ATXN2LQ8WWM7 1075 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 C15orf41Q9Y2V0 281 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 A0A0U1RQK1 487 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 TCRBV21S2A2A0A5A6 115 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 GNAO1P09471 354 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 ADH5P11766 374 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 PPIBP23284 216 aaKnown RBP18.08■□□□□ 0.49
SHANK3-202ENST00000414786 ADH7P40394 386 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 AFF1P51825 1210 aaKnown RBP18.08■□□□□ 0.49
SHANK3-202ENST00000414786 GBX2P52951 348 aaPredicted RBP18.08■□□□□ 0.49
SHANK3-202ENST00000414786 ANKRD26P1Q6NSI1 321 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 FRMD7Q6ZUT3 714 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 DNAJC27Q9NZQ0 273 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 ANGPTL1O95841 491 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 POLR2CP19387 275 aaPredicted RBP18.08■□□□□ 0.49
SHANK3-202ENST00000414786 RAB4BP61018 213 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 SNTA1Q13424 505 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 DPYSQ14117 519 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 STRADBQ9C0K7 418 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 FAM198AQ9UFP1 575 aa18.08■□□□□ 0.49
SHANK3-202ENST00000414786 A0A1W2PPK0 400 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 CLCQ05315 142 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 CARD16Q5EG05 197 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 PRRT3Q5FWE3 981 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 PHTF2Q8N3S3 785 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 OR5J2Q8NH18 312 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 SCAMP5Q8TAC9 235 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 IFNA21P01568 189 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 BCHEP06276 602 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 SFTPBP07988 381 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 AGAP11Q8TF27 550 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 RFKQ969G6 155 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 OR10A4Q9H209 315 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 FABP12A6NFH5 140 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
SHANK3-202ENST00000414786 NOMO3P69849 1222 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 NOMO1Q15155 1222 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 PARP15Q460N3 678 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 RFTN2Q52LD8 501 aaPredicted RBP18.08■□□□□ 0.48
SHANK3-202ENST00000414786 PCED1BQ96HM7 432 aa18.08■□□□□ 0.48
SHANK3-202ENST00000414786 KANTRA0A1W2PQU2 76 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 TCRBV9S1A1TA0A576 114 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 DPPA5A6NC42 116 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 NPIPA2E9PIF3 369 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 NPIPA3F8WFD2 350 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 CFHP08603 1231 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 GRPRP30550 384 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 NUMA1Q14980 2115 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 PDSS1Q5T2R2 415 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SPATA19Q7Z5L4 167 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF100Q8IYN0 542 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SPPL2BQ8TCT7 592 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 C1orf21Q9H246 121 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 PCDHB1Q9Y5F3 818 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 BCKDHAP12694 445 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 CCR8P51685 355 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SLBPQ14493 270 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms