RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SYT6Q5T7P8 510 aaPredicted RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 OR2T5Q6IEZ7 315 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 AKAP14Q86UN6 197 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 SERPINA9Q86WD7 417 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 GATAD2AQ86YP4 633 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 CCDC103Q8IW40 242 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 OR2T29Q8NH02 315 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 TSPAN18Q96SJ8 248 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 CHCHD6Q9BRQ6 235 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 CENPOQ9BU64 300 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 GPR63Q9BZJ6 419 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 REXO4Q9GZR2 422 aaKnown RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 RAD18Q9NS91 495 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 GPR83Q9NYM4 423 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 SPATA7Q9P0W8 599 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 TPRKBQ9Y3C4 175 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 YY2O15391 372 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 UPK1BO75841 260 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 NTRK1P04629 796 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 ADRA2AP08913 450 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 S100A3P33764 101 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 GATMP50440 423 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 PPP5CP53041 499 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 DUSP4Q13115 394 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 CACHD1Q5VU97 1274 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 ZNF621Q6ZSS3 439 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 HIPK1Q86Z02 1210 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 ENTHD1Q8IYW4 607 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 PPP3R2Q96LZ3 170 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 TTPALQ9BTX7 342 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 NECTIN3Q9NQS3 549 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 RLIMQ9NVW2 624 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 ERVK13-1Q9NX77 482 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 NUDT4Q9NZJ9 180 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 OSGIN1Q9UJX0 560 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 GABRQQ9UN88 632 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 DNAH14Q0VDD8 3507 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 TRBV5-3A0A0A0MS03 114 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 OR2A25A4D2G3 310 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 TGM4P49221 684 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 HUNKP57058 714 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 SHQ1Q6PI26 577 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 HORMAD1Q86X24 394 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 KCNJ9Q92806 393 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 NACA2Q9H009 215 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 TRMT13Q9NUP7 481 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 DHRS7Q9Y394 339 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 TMED5Q9Y3A6 229 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 IFRD1O00458 451 aaPredicted RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 EPOP01588 193 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 STSP08842 583 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 SLC10A3P09131 477 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 HOXB8P17481 243 aaPredicted RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 PTPN6P29350 595 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 NRIP1P48552 1158 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 SERPINB10P48595 397 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 IDH2P48735 452 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 MRPL19P49406 292 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 DDX39BQ13838 428 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 ACOX1Q15067 660 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 LRRC73Q5JTD7 316 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 LDLRAD1Q5T700 205 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 RNF219Q5W0B1 726 aaPredicted RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 RFLNAQ6ZTI6 216 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 HSH2DQ96JZ2 352 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 RDH12Q96NR8 316 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 PSKH2Q96QS6 385 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 NDEL1Q9GZM8 345 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 TESMINQ9Y4I5 508 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 PRRC2BQ5JSZ5 2229 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 BNIP3LO60238 219 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 RFPL2O75678 378 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 KLKB1P03952 638 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 MZF1P28698 734 aaPredicted RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 OR1E2P47887 323 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 RPS14P62263 151 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 PCBP2Q15366 365 aaKnown RBP eCLIP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 CTXN3Q4LDR2 81 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 KDM4DQ6B0I6 523 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 ADNP2Q6IQ32 1131 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 FAM217AQ8IXS0 508 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 PARP16Q8N5Y8 322 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 PHF10Q8WUB8 498 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 HOXD1Q9GZZ0 328 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 AASDHPPTQ9NRN7 309 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 RNF6Q9Y252 685 aa14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 TMA7Q9Y2S6 64 aaKnown RBP14.19□□□□□ -0.14
SEMA3F-202ENST00000413852 ANKRD36A6QL64 1941 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 RFXANKO14593 260 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 RAD51BO15315 384 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 TLL1O43897 1013 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 ENGP17813 658 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 ITPKAP23677 461 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 ZNF404Q494X3 552 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 NXNL2Q5VZ03 156 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 LRRC66Q68CR7 880 aa14.18□□□□□ -0.14
SEMA3F-202ENST00000413852 GDPD3Q7L5L3 318 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms