RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 NPEPPSL1A6NEC2 478 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 C2CD4BA6NLJ0 364 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 TCP11X1B4DZS4 312 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 GOLGA8SH3BPF8 625 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 INSIG1O15503 277 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 HTRA2O43464 458 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PHF2O75151 1096 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 CEACAM4O75871 244 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 MTA2O94776 668 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 HEXIM1O94992 359 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 IGHEP01854 428 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 C9P02748 559 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 FAM228BP0C875 321 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 VSIG10L2P0DP72 767 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ZNF30P17039 623 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 LPOP22079 712 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 MMP8P22894 467 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 MCM3P25205 808 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 AK4P27144 223 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PTPN4P29074 926 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 RFC1P35251 1148 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 GNG11P61952 73 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 HGFACQ04756 655 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 FOXM1Q08050 763 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 DNASE1L3Q13609 305 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 CCDC14Q49A88 953 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PYCR3Q53H96 274 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ZFYVE27Q5T4F4 411 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 C1QL3Q5VWW1 255 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 KCTD16Q68DU8 428 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ACAD10Q6JQN1 1059 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 JMJD6Q6NYC1 403 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 IYDQ6PHW0 289 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PRSS42Q7Z5A4 293 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PPP1R3BQ86XI6 285 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 RASGRP3Q8IV61 690 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 SFTPA2Q8IWL1 248 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 IQCKQ8N0W5 287 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PIK3C3Q8NEB9 887 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 OR8K5Q8NH50 307 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 EXD1Q8NHP7 514 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 FAM71BQ8TC56 605 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 FAM172AQ8WUF8 416 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 CTNNBL1Q8WYA6 563 aaPredicted RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 TM9SF4Q92544 642 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ZDHHC12Q96GR4 267 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 C9orf72Q96LT7 481 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ZNF599Q96NL3 588 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 PSKH2Q96QS6 385 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 BRD8Q9H0E9 1235 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ZNF768Q9H5H4 540 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 LRRC19Q9H756 370 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 MRPL47Q9HD33 250 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 LHX9Q9NQ69 397 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 TRMT1Q9NXH9 659 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 TMEM9Q9P0T7 183 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 UVRAGQ9P2Y5 699 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 CNOT8Q9UFF9 292 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 ZNHIT2Q9UHR6 403 aa6.6□□□□□ -1.35
NR1I3-208ENST00000412844 NOCTQ9UK39 431 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 REXO2Q9Y3B8 237 aaKnown RBP6.6□□□□□ -1.35
NR1I3-208ENST00000412844 CSMD1Q96PZ7 3565 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 A0A1W2PRX2 142 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 GOLGA6CA6NDK9 693 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 GOLGA6BA6NDN3 693 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 A8MU76 341 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 TRAFD1O14545 582 aaPredicted RBP6.59□□□□□ -1.35
NR1I3-208ENST00000412844 KRT38O76015 456 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 IPO13O94829 963 aaKnown RBP6.59□□□□□ -1.35
NR1I3-208ENST00000412844 PLATP00750 562 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 ALPPP05187 535 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 GOLGA6DP0CG33 693 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 KRT3P12035 628 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 UNGP13051 313 aaPredicted RBP6.59□□□□□ -1.35
NR1I3-208ENST00000412844 F3P13726 295 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 GM2AP17900 193 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 TCP1P17987 556 aaKnown RBP6.59□□□□□ -1.35
NR1I3-208ENST00000412844 NR1D1P20393 614 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 CTSSP25774 331 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 ITGA3P26006 1051 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 ECHS1P30084 290 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 GPR1P46091 355 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 CLCNKAP51800 687 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 HDAC4P56524 1084 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 WNT3AP56704 352 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 TPI1P60174 286 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 NOMO3P69849 1222 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 ACY1Q03154 408 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 DUSP2Q05923 314 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 IL10RBQ08334 325 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 CNGA3Q16281 694 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 CDO1Q16878 200 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 EIF2S3LQ2VIR3 472 aaKnown RBP6.59□□□□□ -1.35
NR1I3-208ENST00000412844 TRNP1Q6NT89 227 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 KLHL35Q6PF15 583 aa6.59□□□□□ -1.35
NR1I3-208ENST00000412844 MED25Q71SY5 747 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms