RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CHMP24386 653 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SF3B4Q15427 424 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SF1Q15637 639 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 PROKR2Q8NFJ6 384 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 COQ8AQ8NI60 647 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TSNAXQ99598 290 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ULBP1Q9BZM6 244 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 DCSTAMPQ9H295 470 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ABCB9Q9NP78 766 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TDP1Q9NUW8 608 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 NAP1L6A6NFF2 107 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CASTOR2A6NHX0 329 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 FARS2O95363 451 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CDH12P55289 794 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ST3GAL3Q11203 375 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TMEM164Q5U3C3 297 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 KIAA0895Q8NCT3 520 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CD300LFQ8TDQ1 290 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CPB2Q96IY4 423 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 FEM1CQ96JP0 617 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 BMFQ96LC9 184 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 RAD9AQ99638 391 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SNRNP25Q9BV90 132 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SLC28A3Q9HAS3 691 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 MALT1Q9UDY8 824 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 DIP2AQ14689 1571 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CLTCQ00610 1675 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SYN3O14994 580 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 LHCGRP22888 699 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CXCR1P25024 350 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 NR4A2P43354 598 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ART1P52961 327 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 HSD17B7P56937 341 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CDK3Q00526 305 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 PUM1Q14671 1186 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ZNF404Q494X3 552 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 KCTD18Q6PI47 426 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TREX2Q9BQ50 279 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 URM1Q9BTM9 101 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 AGXT2Q9BYV1 514 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TIGARQ9NQ88 270 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 UCKL1Q9NWZ5 548 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 A0A075B6Q4 140 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 FXYD6-FXYD2A0A087WZ82 144 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TLR4O00206 839 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TBL1XO60907 577 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 DIRAS3O95661 229 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ZSCAN5DPP0CG00 497 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CD36P16671 472 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 BMP8BP34820 402 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 WNT3AP56704 352 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CYP4F8P98187 520 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 GSTM4Q03013 218 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CLCQ05315 142 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SPOCK1Q08629 439 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 MLC1Q15049 377 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 BMP8AQ7Z5Y6 402 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TMPRSS11BQ86T26 416 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CADM2Q8N3J6 435 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 XAGE5Q8WWM1 108 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 LIN37Q96GY3 246 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CIB1Q99828 191 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CORO1BQ9BR76 489 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 GPR88Q9GZN0 384 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 FXYD6Q9H0Q3 95 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 FAM120CQ9NX05 1096 aaKnown RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CAPN8A6NHC0 703 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 D6RAR5 112 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 POLR1CO15160 346 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 HTR1AP08908 422 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 LAG3P18627 525 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 OXTRP30559 389 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 HOXA9P31269 272 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SLC5A3P53794 718 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 PPATQ06203 517 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ENPP2Q13822 863 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CLVS2Q5SYC1 327 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 KIAA0930Q6ICG6 404 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-203ENST00000412145 MTFR2Q6P444 385 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TRIM74Q86UV6 250 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TRIM73Q86UV7 250 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CCDC71LQ8N9Z2 235 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 CAMKVQ8NCB2 501 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 SHKBP1Q8TBC3 707 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 RNF128Q8TEB7 428 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 RGMAQ96B86 450 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 YIPF4Q9BSR8 244 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 MRIQ9BWK5 157 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TBL1XR1Q9BZK7 514 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 TMEM45AQ9NWC5 275 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 ASB6Q9NWX5 421 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 LMTK2Q8IWU2 1503 aa7.23□□□□□ -1.25
PTPN3-203ENST00000412145 IL1BP01584 269 aa7.22□□□□□ -1.25
PTPN3-203ENST00000412145 H1F0P07305 194 aaKnown RBP7.22□□□□□ -1.25
PTPN3-203ENST00000412145 PTPRAP18433 802 aa7.22□□□□□ -1.25
PTPN3-203ENST00000412145 TARDBPQ13148 414 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTPN3-203ENST00000412145 FAM183BPQ6ZVS7 135 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms