RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 ISL2Q96A47 359 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 NXNL1Q96CM4 212 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 RNF31Q96EP0 1072 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 HIST1H2AHQ96KK5 128 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 HIST1H2AJQ99878 128 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 H2AFJQ9BTM1 129 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 VPS11Q9H270 941 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 FAM60AQ9NP50 221 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 SLC6A20Q9NP91 592 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 FBXO8Q9NRD0 319 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 THSD1Q9NS62 852 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 FETUBQ9UGM5 382 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 TAC3Q9UHF0 121 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 ACOT9Q9Y305 439 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 OARD1Q9Y530 152 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 PCDHB11Q9Y5F2 797 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 AKAP13Q12802 2813 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 TLX3O43711 291 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 NRP2O60462 931 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 KRT37O76014 449 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 SNRPAP09012 282 aaKnown RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 TFEBP19484 476 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 RAB15P59190 212 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 NAE1Q13564 534 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 DEFB110Q30KQ9 67 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 FCRL6Q6DN72 434 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 CDHR3Q6ZTQ4 885 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 EPS8L3Q8TE67 593 aaKnown RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 EXT2Q93063 718 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 KIAA1191Q96A73 305 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 FBXL8Q96CD0 374 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 MED8Q96G25 268 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 ZNF578Q96N58 590 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 CNTNAP3BQ96NU0 1288 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 EGFL8Q99944 293 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 CCDC77Q9BR77 488 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 DDA1Q9BW61 102 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 CNTNAP3Q9BZ76 1288 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 ALG9Q9H6U8 611 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 PDE7BQ9NP56 450 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 FGF21Q9NSA1 209 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 PSMC3IPQ9P2W1 217 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-206ENST00000412056 TBK1Q9UHD2 729 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 TLK1Q9UKI8 766 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 PCDHGA7Q9Y5G6 932 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 PCDHGA3Q9Y5H0 932 aa13.43□□□□□ -0.26
CPNE1-206ENST00000412056 APC2O95996 2303 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 ACACAQ13085 2346 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 AHCTF1Q8WYP5 2266 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 NCF1BA6NI72 391 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 SMIM23A6NLE4 172 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 NCF1CA8MVU1 366 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 POLR1CO15160 346 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 NVLO15381 856 aaKnown RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 HCRTR1O43613 425 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 FKBP9O95302 570 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 NCF1P14598 390 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 CMPK1P30085 196 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 SLC26A3P40879 764 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 GRIA3P42263 894 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 SLCO1A2P46721 670 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 GABRA4P48169 554 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 CDKL1Q00532 357 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 ACY1Q03154 408 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 TGFBIQ15582 683 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 DCAF12Q5T6F0 453 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 TMEM164Q5U3C3 297 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 PRAMEF13Q5VWM6 474 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 ICE2Q659A1 982 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 FIGLAQ6QHK4 219 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 CEACAM20Q6UY09 585 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 CCDC91Q7Z6B0 441 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 ISCA2Q86U28 154 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 PLD6Q8N2A8 252 aaKnown RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 OR2W6PQ8NHA6 318 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 PYCR2Q96C36 320 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 SGPP1Q9BX95 441 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 NMRAL1Q9HBL8 299 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 MRPS30Q9NP92 439 aaKnown RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 INTS7Q9NVH2 962 aaKnown RBP13.42□□□□□ -0.26
CPNE1-206ENST00000412056 RARRES3Q9UL19 164 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 RNF112Q9ULX5 631 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 SH2B3Q9UQQ2 575 aa13.42□□□□□ -0.26
CPNE1-206ENST00000412056 IGKV1-8A0A0C4DH67 115 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 IQANK1A0A1B0GTG1 560 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 TMEM8BA6NDV4 472 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 TMEM150CB9EJG8 249 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 TAF4O00268 1085 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 KLHL2O95198 593 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 CCNDBP1O95273 360 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 TIAF1O95411 115 aa13.41□□□□□ -0.26
CPNE1-206ENST00000412056 ANXA5P08758 320 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms