RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FBXO39Q8N4B4 442 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 KLHDC1Q8N7A1 406 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 PDILTQ8N807 584 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 OR13C3Q8NGS6 347 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 MRAPQ8TCY5 172 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 NPRL2Q8WTW4 380 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 NKX3-1Q99801 234 aaPredicted RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 LMF2Q9BU23 707 aaKnown RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 ITPAQ9BY32 194 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TLE6Q9H808 572 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 CHMP1AQ9HD42 196 aaPredicted RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 UBN1Q9NPG3 1134 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 KRT84Q9NSB2 600 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 EHD2Q9NZN4 543 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 BAIAP2L1Q9UHR4 511 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 HACL1Q9UJ83 578 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 SLC13A4Q9UKG4 626 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TSPAN16Q9UKR8 245 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 PLAGL1Q9UM63 463 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 MTMR6Q9Y217 621 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 WIPI2Q9Y4P8 454 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 R4GN57 208 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TRBV4-1A0A0J9YWV2 114 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 FAM168BA1KXE4 195 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 ANKUB1A6NFN9 424 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 C2orf81A6NN90 581 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RTCAO00442 366 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 TFECO14948 347 aaPredicted RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RNASEH1O60930 286 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RNASEH2AO75792 299 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 NXPH4O95158 308 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RTN3O95197 1032 aaPredicted RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RENP00797 406 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 CLTBP09497 229 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 FDPSP14324 419 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RPL35AP18077 110 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 MPZP25189 248 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 SLC6A6P31641 620 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 GARSP41250 739 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 NDUFV3P56181 108 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 HNRNPKP61978 463 aaKnown RBP eCLIP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 IRX4P78413 519 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 MAT1AQ00266 395 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 DHODHQ02127 395 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 GOLGA8DPQ0D2H9 430 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 BIRC3Q13489 604 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 KRT33BQ14525 404 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNF79Q15937 498 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 SYT14P1Q58G82 188 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 RNASEH2BQ5TBB1 312 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 IGFL3Q6UXB1 125 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMEM64Q6YI46 380 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 CDHR3Q6ZTQ4 885 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 IKBIPQ70UQ0 350 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 CHST9Q7L1S5 443 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 SLC37A3Q8NCC5 494 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 MOSPD2Q8NHP6 518 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 FLVCR1-AS1Q8TAF5 88 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 LRRC59Q96AG4 307 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 LGMNQ99538 433 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 MGME1Q9BQP7 344 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 UBAC1Q9BSL1 405 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 HOXD1Q9GZZ0 328 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 KCNK15Q9H427 330 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 PPANQ9NQ55 473 aaKnown RBP1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 SMC4Q9NTJ3 1288 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 PDP2Q9P2J9 529 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 SPATA31D1Q6ZQQ2 1576 aa1.03□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNFX1Q9P2E3 1918 aaKnown RBP1.03□□□□□ -2.25
RNU2-55P-201ENST00000411146 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 IGHV3-38A0A0C4DH36 116 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 TRBV5-5A0A0J9YX44 114 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 LNP1A1A4G5 178 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 HAT1O14929 419 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 PAPSS1O43252 624 aaPredicted RBP1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 MED24O75448 989 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 CEACAM4O75871 244 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 ACTN1P12814 892 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 AOC1P19801 751 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 TNFAIP3P21580 790 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 DNASE1P24855 282 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 PIK3R1P27986 724 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 CSTF2P33240 577 aaKnown RBP eCLIP1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 HADHAP40939 763 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 LMAN1P49257 510 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 PPM1FP49593 454 aaPredicted RBP1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 GSK3BP49841 420 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 CDH8P55286 799 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 CDK3Q00526 305 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 ZNF177Q13360 481 aaPredicted RBP1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 PTPN14Q15678 1187 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 TAB1Q15750 504 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 ODF4Q2M2E3 257 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 SLC35D3Q5M8T2 416 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 ELFN2Q5R3F8 820 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 SNX30Q5VWJ9 437 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 LCLAT1Q6UWP7 414 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 G2E3Q7L622 706 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 ARHGAP22Q7Z5H3 698 aa1.02□□□□□ -2.25
RNU2-55P-201ENST00000411146 ADCK1Q86TW2 530 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms