RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 HIST1H2AGP0C0S8 130 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 JUNBP17275 347 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 HIST1H2ADP20671 130 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ATN1P54259 1190 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 VEPH1Q14D04 833 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 POM121L1PQ3SYA9 428 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 PRAMEF9Q5VWM5 478 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 CRTC1Q6UUV9 634 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ANGPTL8Q6UXH0 198 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.94□□□□□ -0.665e-7■■■■□ 20.3
ITGA6-203ENST00000409532 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 FKBP10Q96AY3 582 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ALG14Q96F25 216 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 HIST1H2AHQ96KK5 128 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 COPS8Q99627 209 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 HIST1H2AJQ99878 128 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 H2AFJQ9BTM1 129 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ZDHHC6Q9H6R6 413 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 PDP1Q9P0J1 537 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 RECQL5O94762 991 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 UGT2B4P06133 528 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 COL6A1P12109 1028 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ENGP17813 658 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 B4GALNT1Q00973 533 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 LMAN2Q12907 356 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 NPTX1Q15818 432 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF691Q5VV52 312 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 CPZQ66K79 652 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 ADNP2Q6IQ32 1131 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 PDE12Q6L8Q7 609 aaKnown RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 Q6ZPB1 254 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 TRIM74Q86UV6 250 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 TRIM73Q86UV7 250 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 BBS7Q8IWZ6 715 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 C2orf15Q8WU43 125 aaKnown RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 USP7Q93009 1102 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 TRPS1Q9UHF7 1281 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 TMEM247A6NEH6 219 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 OR2AG2A6NM03 316 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 EVPLLA8MZ36 301 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 M0R3G1 203 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ERN1O75460 977 aaKnown RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ABCB1P08183 1280 aaPredicted RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 DAPP51397 102 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CLDN8P56748 225 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 VLDLRP98155 873 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CHIT1Q13231 466 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 MAPK11Q15759 364 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RGS21Q2M5E4 152 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 PAGE2BQ5JRK9 111 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 TMEM150AQ86TG1 271 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 SYT12Q8IV01 421 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 LMNTD1Q8N9Z9 388 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 DCAF4L2Q8NA75 395 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF540Q8NDQ6 660 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RORBQ92753 470 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 SCAMP4Q969E2 229 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 P2RY13Q9BPV8 354 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 HTATIP2Q9BUP3 242 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ALOXE3Q9BYJ1 711 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 KCNH6Q9H252 994 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ATP13A3Q9H7F0 1226 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RMND5AQ9H871 391 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 KIF17Q9P2E2 1029 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 DAPK2Q9UIK4 370 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ERVK-11Q9UQG0 969 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 SAMHD1Q9Y3Z3 626 aaKnown RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 GMPPBQ9Y5P6 360 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 NINQ8N4C6 2090 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 C5orf42Q9H799 3197 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 TRBV5-3A0A0A0MS03 114 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF99A8MXY4 864 aaPredicted RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CLIC1O00299 241 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 FPGTO14772 594 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 NUDT7P0C024 238 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RPS3P23396 243 aaKnown RBP eCLIP10.93□□□□□ -0.662e-13■□□□□ 10.9
ITGA6-203ENST00000409532 KIR3DL1P43629 444 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 NKX3-2P78367 333 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 OCA2Q04671 838 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CBX2Q14781 532 aaPredicted RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 TRIM16LQ309B1 348 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CYP2U1Q7Z449 544 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 HORMAD1Q86X24 394 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CMTM8Q8IZV2 173 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 PJA1Q8NG27 643 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 ZFP90Q8TF47 636 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RPL3LQ92901 407 aaKnown RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 MAL2Q969L2 176 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 MAGED4Q96JG8 741 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 THG1LQ9NWX6 298 aaKnown RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 NADKO95544 446 aaPredicted RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 RETP07949 1114 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 LHCGRP22888 699 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 SERPINA4P29622 427 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 NSG1P42857 185 aa10.93□□□□□ -0.66
ITGA6-203ENST00000409532 CLK3P49761 638 aaKnown RBP10.93□□□□□ -0.66
ITGA6-203ENST00000409532 NCS1P62166 190 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms