RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 MAGEA8P43361 318 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 NKX3-2P78367 333 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 PON2Q15165 354 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 TEAD2Q15562 447 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 HKDC1Q2TB90 917 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 CNKSR3Q6P9H4 555 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 MACC1Q6ZN28 852 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 TCEAL8Q8IYN2 117 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 FRS2Q8WU20 508 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 AP2M1Q96CW1 435 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 TRMT2BQ96GJ1 504 aaKnown RBP11.58□□□□□ -0.56
PCNX4-204ENST00000406949 TCF25Q9BQ70 676 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 C1QTNF3Q9BXJ4 246 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 OSBPL6Q9BZF3 934 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 SCN3BQ9NY72 215 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 RAPGEFL1Q9UHV5 662 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 ZNF510Q9Y2H8 683 aa11.58□□□□□ -0.56
PCNX4-204ENST00000406949 TRPM7Q96QT4 1865 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 XPNPEP2O43895 674 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 FZD6O60353 706 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 ERN1O75460 977 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 LEFTY1O75610 366 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 CDK4P11802 303 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PRPS2P11908 318 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TCF3P15923 654 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 ENGP17813 658 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 LHCGRP22888 699 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 RPS3P23396 243 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 SHMT2P34897 504 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 POLR2IP36954 125 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PDE12Q6L8Q7 609 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 P3H2Q8IVL5 708 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 FAM81AQ8TBF8 368 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 NCSTNQ92542 709 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 CLP1Q92989 425 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PDLIM5Q96HC4 596 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 REXO5Q96IC2 774 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 P2RY13Q9BPV8 354 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 SLC46A2Q9BY10 475 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 C8orf4Q9NR00 106 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PDP1Q9P0J1 537 aaPredicted RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TDRKHQ9Y2W6 561 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 GMPPBQ9Y5P6 360 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 SNX8Q9Y5X2 465 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TCRBV5S2A0A599 114 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TMX2-CTNND1H3BSU7 103 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 ANXA4P09525 319 aaPredicted RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TFPTP0C1Z6 253 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TTKP33981 857 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 FGD3Q5JSP0 725 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 NANOGNBQ7Z5D8 188 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 ADCK2Q7Z695 626 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PTRH1Q86Y79 214 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 DPP10Q8N608 796 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 GOLM1Q8NBJ4 401 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 FIBINQ8TAL6 211 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TCEAL4Q96EI5 215 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 CENPOQ9BU64 300 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 REEP1Q9H902 201 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 DYRK4Q9NR20 520 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 AASDHPPTQ9NRN7 309 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 SCHIP1Q9P0W5 487 aaPredicted RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PCDHGA11Q9Y5H2 935 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TSPAN6O43657 245 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 FAM20BO75063 409 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 PPM1AP35813 382 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 SPINT3P49223 89 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 C21orf59P57076 290 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 USP39Q53GS9 565 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 NOXRED1Q6NXP6 359 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 TMEM220Q6QAJ8 160 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 C11orf96Q7Z7L8 435 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 RBM23Q86U06 439 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 CFAP206Q8IYR0 622 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 CLECL1Q8IZS7 167 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 C1orf52Q8N6N3 182 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 OR52J3Q8NH60 311 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 C17orf50Q8WW18 174 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 DUS3LQ96G46 650 aaKnown RBP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 HEPHQ9BQS7 1158 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 SLC29A3Q9BZD2 475 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCNX4-204ENST00000406949 COQ6Q9Y2Z9 468 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 VWA8A3KMH1 1905 aa11.57□□□□□ -0.56
PCNX4-204ENST00000406949 MYOFQ9NZM1 2061 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 MAGEB17A8MXT2 336 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 TTC34A8MYJ7 566 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 TOR1BO14657 336 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 ACOX3O15254 700 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 OPN1SWP03999 348 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 CCL5P13501 91 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 CHI3L1P36222 383 aaPredicted RBP11.56□□□□□ -0.56
PCNX4-204ENST00000406949 CDKN2CP42773 168 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 GJA8P48165 433 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 ALDH9A1P49189 494 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 NTHL1P78549 312 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 SPATS1Q496A3 300 aa11.56□□□□□ -0.56
PCNX4-204ENST00000406949 RAET1GQ6H3X3 334 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms