RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 GTF2H4Q92759 462 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 APOLD1Q96LR9 279 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 VCXQ9H320 206 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 SGK2Q9HBY8 427 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 CCM2LQ9NUG4 571 aaPredicted RBP23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 ARMC1Q9NVT9 282 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 GPRC5BQ9NZH0 403 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 DHRS12A0PJE2 317 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 H0YIV9 168 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 CAPNS1P04632 268 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 ACPPP15309 386 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 IL10P22301 178 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 XKR5Q6UX68 686 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 TICAM1Q8IUC6 712 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 RNF175Q8N4F7 328 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 OR8J3Q8NGG0 315 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 TSSK3Q96PN8 268 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 PIF1Q9H611 641 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 PRM3Q9NNZ6 103 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 VPS29Q9UBQ0 182 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 PRKAB1Q9Y478 270 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 PCDHGA11Q9Y5H2 935 aa23.91■■□□□ 1.42
DNMT3A-206ENST00000406659 SDC1P18827 310 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 PSMA4P25789 261 aaKnown RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 S100A3P33764 101 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 MTHFRP42898 656 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 CDK3Q00526 305 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 TSTA3Q13630 321 aaPredicted RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 DDX39BQ13838 428 aaKnown RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 STARD3Q14849 445 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 ZNF776Q68DI1 518 aaPredicted RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 NOXRED1Q6NXP6 359 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 MTSS1LQ765P7 747 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 C11orf96Q7Z7L8 435 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 AMZ2Q86W34 360 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 PROSER1Q86XN7 944 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 PPWD1Q96BP3 646 aaKnown RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 UHRF1Q96T88 793 aaPredicted RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 MTERF1Q99551 399 aaKnown RBP23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 GDF15Q99988 308 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 AURKCQ9UQB9 309 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 DYRK1BQ9Y463 629 aa23.9■■□□□ 1.42
DNMT3A-206ENST00000406659 A0A1W2PP55 124 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 K7EQS6 105 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 DFNA5O60443 496 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 MTHFD1P11586 935 aaKnown RBP23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 ACADLP28330 430 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 MTPNP58546 118 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 DLX2Q07687 328 aaPredicted RBP23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 MED21Q13503 144 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 TBCELQ5QJ74 424 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 UNC5DQ6UXZ4 953 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 FAM83HQ6ZRV2 1179 aaPredicted RBP23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 LRRTM4Q86VH4 590 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 GANCQ8TET4 914 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 EME1Q96AY2 570 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 SEMA6AQ9H2E6 1030 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 ITM2CQ9NQX7 267 aa23.89■■□□□ 1.42
DNMT3A-206ENST00000406659 C5orf42Q9H799 3197 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 MAGEA13PA6NCF6 341 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 TXNDC9O14530 226 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 TIPRLO75663 272 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 HSD3B1P14060 373 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 NCK1P16333 377 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 TACR1P25103 407 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 HSD3B2P26439 372 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 SOX11P35716 441 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 KIR2DL1P43626 348 aaPredicted RBP23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 TBPL1P62380 186 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 RPA4Q13156 261 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 SELPLGQ14242 412 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 DNAJB8Q8NHS0 232 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 ZDHHC5Q9C0B5 715 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 SPATA6Q9NWH7 488 aaPredicted RBP23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 SERGEFQ9UGK8 458 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 PCDHB3Q9Y5E6 796 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 HNRNPRO43390 633 aaKnown RBP23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 AKAP10O43572 662 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 GPIP06744 558 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 PCNAP12004 261 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 OR4D2P58180 307 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 FOLH1Q04609 750 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 PGS1Q32NB8 556 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 C2orf27AQ580R0 203 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 TMEM154Q6P9G4 183 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 SLCO4C1Q6ZQN7 724 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 AMIGO2Q86SJ2 522 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 GATA6Q92908 595 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 NEIL2Q969S2 332 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 FCRL1Q96LA6 429 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 SH3GL1Q99961 368 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 OR52A5Q9H2C5 316 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 RMND5AQ9H871 391 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 BRF2Q9HAW0 419 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 VAPAQ9P0L0 249 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 USP22Q9UPT9 525 aa23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 PCYT1BQ9Y5K3 369 aaPredicted RBP23.88■■□□□ 1.41
DNMT3A-206ENST00000406659 KANSL1LA0AUZ9 987 aa23.87■■□□□ 1.41
DNMT3A-206ENST00000406659 PNLIPRP1P54315 467 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms