RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 CCNFP41002 786 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 GRIA1P42261 906 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 GRIA3P42263 894 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 CARSP49589 748 aaKnown RBP18.56■□□□□ 0.56
HDAC11-205ENST00000404548 ZNF169Q14929 603 aaPredicted RBP18.56■□□□□ 0.56
HDAC11-205ENST00000404548 TLR1Q15399 786 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 RBBP7Q16576 425 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 PRMT9Q6P2P2 845 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 SLC34A3Q8N130 599 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 PPHLN1Q8NEY8 458 aaKnown RBP18.56■□□□□ 0.56
HDAC11-205ENST00000404548 CFAP61Q8NHU2 1237 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 GSDMBQ8TAX9 411 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 P2RY12Q9H244 342 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 GNPTGQ9UJJ9 305 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 CSAG2Q9Y5P2 127 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 DOCK10Q96BY6 2186 aa18.56■□□□□ 0.56
HDAC11-205ENST00000404548 CACNA1DQ01668 2161 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 IQCF5A8MTL0 148 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 CTSVO60911 334 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 C1orf105O95561 183 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 MCM3P25205 808 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 PER3P56645 1201 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 HIF1AQ16665 826 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 RPUSD3Q6P087 351 aaKnown RBP18.55■□□□□ 0.56
HDAC11-205ENST00000404548 RNF44Q7L0R7 432 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 DNAJB14Q8TBM8 379 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 FAR1Q8WVX9 515 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 LMF1Q96S06 567 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 TRIM56Q9BRZ2 755 aaKnown RBP18.55■□□□□ 0.56
HDAC11-205ENST00000404548 EIF2B3Q9NR50 452 aaKnown RBP18.55■□□□□ 0.56
HDAC11-205ENST00000404548 RAB6BQ9NRW1 208 aa18.55■□□□□ 0.56
HDAC11-205ENST00000404548 IGLV3-12A0A075B6K2 115 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 A0A1W2PQ72 361 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 PHF2O75151 1096 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 HPP00738 406 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 IFNB1P01574 187 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 APRTP07741 180 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 COL8A1P27658 744 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 EMP3P54852 163 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 MFAP5Q13361 173 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 PCID2Q5JVF3 399 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 PTRHD1Q6GMV3 140 aaKnown RBP18.54■□□□□ 0.56
HDAC11-205ENST00000404548 ISLR2Q6UXK2 745 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 TAX1BP1Q86VP1 789 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 C2orf73Q8N5S3 287 aaPredicted RBP18.54■□□□□ 0.56
HDAC11-205ENST00000404548 OR2L3Q8NG85 312 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 MAGEC3Q8TD91 643 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 GRHL3Q8TE85 626 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.54■□□□□ 0.56
HDAC11-205ENST00000404548 BAG1Q99933 345 aaPredicted RBP18.54■□□□□ 0.56
HDAC11-205ENST00000404548 SLX1AQ9BQ83 275 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 SOX17Q9H6I2 414 aaPredicted RBP18.54■□□□□ 0.56
HDAC11-205ENST00000404548 TREX1Q9NSU2 369 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 SPATA7Q9P0W8 599 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 PAK5Q9P286 719 aa18.54■□□□□ 0.56
HDAC11-205ENST00000404548 MARCH4Q9P2E8 410 aaPredicted RBP18.54■□□□□ 0.56
HDAC11-205ENST00000404548 APCP25054 2843 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 HYKKA2RU49 373 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 AP3B1O00203 1094 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 PCDH17O14917 1159 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 CD3EAPO15446 510 aaKnown RBP18.53■□□□□ 0.56
HDAC11-205ENST00000404548 FDXRP22570 491 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 ATP5DP30049 168 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 OR1D4P47884 311 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 VSX2P58304 361 aaPredicted RBP18.53■□□□□ 0.56
HDAC11-205ENST00000404548 CDC16Q13042 620 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 WASHC2DQ5SRD0 308 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 SEL1L2Q5TEA6 688 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 OTOAQ7RTW8 1153 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 TMEM139Q8IV31 216 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 KRT222Q8N1A0 295 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 RNF10Q8N5U6 811 aaKnown RBP18.53■□□□□ 0.56
HDAC11-205ENST00000404548 OR2A1Q8NGT9 310 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 FOPNLQ96NB1 174 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 CRB3Q9BUF7 120 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 IL22Q9GZX6 179 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 ZNF304Q9HCX3 659 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 ZNF282Q9UDV7 671 aaPredicted RBP18.53■□□□□ 0.56
HDAC11-205ENST00000404548 CIDEBQ9UHD4 219 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 TTC7AQ9ULT0 858 aaPredicted RBP18.53■□□□□ 0.56
HDAC11-205ENST00000404548 ZNF148Q9UQR1 794 aa18.53■□□□□ 0.56
HDAC11-205ENST00000404548 DIDO1Q9BTC0 2240 aaKnown RBP18.53■□□□□ 0.56
HDAC11-205ENST00000404548 OR2A25A4D2G3 310 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 ALOX12BO75342 701 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 USP1O94782 785 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 ZGLP1P0C6A0 271 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 ACPPP15309 386 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 OCA2Q04671 838 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 KLC1Q07866 573 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 Q0VFX4 171 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 GBX1Q14549 363 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 INAQ16352 499 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 MUM1Q2TAK8 710 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 ATG9BQ674R7 924 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 FRMPD2BQ6IN97 320 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 LDB1Q86U70 411 aaPredicted RBP18.52■□□□□ 0.56
HDAC11-205ENST00000404548 PARP9Q8IXQ6 854 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 CCDC89Q8N998 374 aa18.52■□□□□ 0.56
HDAC11-205ENST00000404548 STT3BQ8TCJ2 826 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms