RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 WDFY3Q8IZQ1 3526 aa28.31■■■□□ 2.12
USP42-202ENST00000404008 IGHV5-51A0A0C4DH38 117 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 TK2O00142 265 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 HYAL3O43820 417 aaPredicted RBP28.3■■■□□ 2.12
USP42-202ENST00000404008 S100BP04271 92 aaPredicted RBP28.3■■■□□ 2.12
USP42-202ENST00000404008 CDH3P22223 829 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 CCND1P24385 295 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 CRHR1P34998 444 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 SF1Q15637 639 aaKnown RBP28.3■■■□□ 2.12
USP42-202ENST00000404008 TNFAIP8L3Q5GJ75 292 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 SULT1C3Q6IMI6 304 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 CDHR3Q6ZTQ4 885 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 TRIM73Q86UV7 250 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 TMEM151AQ8N4L1 468 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 RUFY1Q96T51 708 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 STRADBQ9C0K7 418 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 MRPL46Q9H2W6 279 aaKnown RBP28.3■■■□□ 2.12
USP42-202ENST00000404008 CENPHQ9H3R5 247 aa28.3■■■□□ 2.12
USP42-202ENST00000404008 ZNF768Q9H5H4 540 aaKnown RBP28.3■■■□□ 2.12
USP42-202ENST00000404008 CACNA1AO00555 2505 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 A0A0J9YY10 115 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 TAPBPO15533 448 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 GGT5P36269 586 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 CCT5P48643 541 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 C16orf72Q14CZ0 275 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 C16orf46Q6P387 395 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 MARCH9Q86YJ5 346 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 FAM20CQ8IXL6 584 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 OR2L3Q8NG85 312 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 KLHL6Q8WZ60 621 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 PYCR2Q96C36 320 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 LIN37Q96GY3 246 aaPredicted RBP28.29■■■□□ 2.12
USP42-202ENST00000404008 ACAT2Q9BWD1 397 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 MKS1Q9NXB0 559 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 SENP1Q9P0U3 644 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 TAC3Q9UHF0 121 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 PTBP2Q9UKA9 531 aaKnown RBP28.29■■■□□ 2.12
USP42-202ENST00000404008 WASF3Q9UPY6 502 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 KIF26BQ2KJY2 2108 aa28.29■■■□□ 2.12
USP42-202ENST00000404008 COPEO14579 308 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 HGSO14964 777 aaPredicted RBP28.28■■■□□ 2.12
USP42-202ENST00000404008 FKBP9O95302 570 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 SBK3P0C264 359 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 MYZAPP0CAP1 466 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 SLC6A12P48065 614 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 C18orf21Q32NC0 220 aaPredicted RBP28.28■■■□□ 2.12
USP42-202ENST00000404008 PTCHD3Q3KNS1 767 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 THEMIS2Q5TEJ8 643 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 PRAMEF13Q5VWM6 474 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 CAPN13Q6MZZ7 669 aaPredicted RBP28.28■■■□□ 2.12
USP42-202ENST00000404008 KLHDC8AQ8IYD2 350 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 MIPEPQ99797 713 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 TMEM79Q9BSE2 394 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 PCBD2Q9H0N5 130 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 VIPAS39Q9H9C1 493 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 ABCF3Q9NUQ8 709 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 INTS7Q9NVH2 962 aaKnown RBP28.28■■■□□ 2.12
USP42-202ENST00000404008 WWOXQ9NZC7 414 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 CPSF2Q9P2I0 782 aaKnown RBP28.28■■■□□ 2.12
USP42-202ENST00000404008 SPTBN2O15020 2390 aa28.28■■■□□ 2.12
USP42-202ENST00000404008 SLC9B1P1A6NJY1 282 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 TARM1B6A8C7 271 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 MAP2K7O14733 419 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 KLK8O60259 260 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 ZBTB11O95625 1053 aaPredicted RBP28.27■■■□□ 2.12
USP42-202ENST00000404008 PVRP15151 417 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 ST6GAL1P15907 406 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 KIAA1614Q5VZ46 1190 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 ICE2Q659A1 982 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 KMT5CQ86Y97 462 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 BANPQ8N9N5 519 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 ALKBH8Q96BT7 664 aaKnown RBP28.27■■■□□ 2.12
USP42-202ENST00000404008 APOPT1Q96IL0 206 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 TRAPPC9Q96Q05 1148 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 EMCNQ9ULC0 261 aa28.27■■■□□ 2.12
USP42-202ENST00000404008 AGPSO00116 658 aa28.26■■■□□ 2.12
USP42-202ENST00000404008 IPO13O94829 963 aaKnown RBP28.26■■■□□ 2.12
USP42-202ENST00000404008 SEPHS1P49903 392 aa28.26■■■□□ 2.12
USP42-202ENST00000404008 YBX1P67809 324 aaKnown RBP28.26■■■□□ 2.12
USP42-202ENST00000404008 PRDX1Q06830 199 aaKnown RBP28.26■■■□□ 2.12
USP42-202ENST00000404008 SLC41A2Q96JW4 573 aa28.26■■■□□ 2.12
USP42-202ENST00000404008 SMC6Q96SB8 1091 aa28.26■■■□□ 2.12
USP42-202ENST00000404008 CNOT10Q9H9A5 744 aaKnown RBP28.26■■■□□ 2.12
USP42-202ENST00000404008 GRID1Q9ULK0 1009 aa28.26■■■□□ 2.12
USP42-202ENST00000404008 GOLGA6L10A6NI86 522 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 CCNDBP1O95273 360 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 GFAPP14136 432 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 NELFEP18615 380 aaKnown RBP28.25■■■□□ 2.11
USP42-202ENST00000404008 CMPK1P30085 196 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 ALDH18A1P54886 795 aaKnown RBP28.25■■■□□ 2.11
USP42-202ENST00000404008 PFKFB4Q16877 469 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 FBXO48Q5FWF7 155 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 LCTLQ6UWM7 567 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 FBXO39Q8N4B4 442 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 AGBL5Q8NDL9 886 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 UBTD2Q8WUN7 234 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 OR4K3Q96R72 315 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 KLHL25Q9H0H3 589 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 TMBIM4Q9HC24 238 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 TMCO1Q9UM00 188 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms