RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 STK16O75716 305 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 WDR47O94967 919 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 OAS2P29728 719 aaKnown RBP32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 PLA2G5P39877 138 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 NFKB2Q00653 900 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 ILKQ13418 452 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 OR2A1Q8NGT9 310 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 FLVCR1-AS1Q8TAF5 88 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 UBTD2Q8WUN7 234 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 TGM7Q96PF1 710 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 OR2A14Q96R47 310 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 TMEM9Q9P0T7 183 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 TAC3Q9UHF0 121 aa32.14■■■□□ 2.74
CSNK1E-204ENST00000403904 STX16-NPEPL1H3BU86 382 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 STX16O14662 325 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 GIPC1O14908 333 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 CCNT2O60583 730 aaKnown RBP32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 CPNE6O95741 557 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 HOXB3P14651 431 aaPredicted RBP32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 UGT2B7P16662 529 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 PRDX3P30048 256 aaKnown RBP32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 SLC18A1P54219 525 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 SQSTM1Q13501 440 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 TMPRSS9Q7Z410 1059 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 THOC6Q86W42 341 aaKnown RBP32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 SLC22A9Q8IVM8 553 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 C10orf107Q8IVU9 208 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 FAM20CQ8IXL6 584 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 MGARPQ8TDB4 240 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 SLC22A18Q96BI1 424 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 OR4K3Q96R72 315 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 GFM1Q96RP9 751 aaKnown RBP32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 MECRQ9BV79 373 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 RAB33BQ9H082 229 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 PCDHB11Q9Y5F2 797 aa32.13■■■□□ 2.73
CSNK1E-204ENST00000403904 MATN2O00339 956 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 CEACAM1P13688 526 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 CCND1P24385 295 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 MPSTP25325 297 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 EEF1DP29692 281 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 PRKAA2P54646 552 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 YBX1P67809 324 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 SF1Q15637 639 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 PRAMEF13Q5VWM6 474 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 WDR74Q6RFH5 385 aaPredicted RBP32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 SLCO6A1Q86UG4 719 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 PPM1MQ96MI6 270 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 ACSS2Q9NR19 701 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 OXSMQ9NWU1 459 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 NKIRAS1Q9NYS0 192 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 EPHA6Q9UF33 1036 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 KLHL3Q9UH77 587 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 POMT2Q9UKY4 750 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 PCDHGA1Q9Y5H4 931 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 TNPO3Q9Y5L0 923 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 PIEZO1Q92508 2521 aa32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 CNOT1A5YKK6 2376 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-204ENST00000403904 NTN3O00634 580 aaPredicted RBP32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 NOVA1P51513 510 aaKnown RBP32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 PCBP2Q15366 365 aaKnown RBP eCLIP32.11■■■□□ 2.731e-6■■■■■ 27.4
CSNK1E-204ENST00000403904 SPESP1Q6UW49 350 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 FAM92BQ6ZTR7 304 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 RAB44Q7Z6P3 723 aaPredicted RBP32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 PLXDC1Q8IUK5 500 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 KLHDC8AQ8IYD2 350 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 CCDC126Q96EE4 140 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 MOCOSQ96EN8 888 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 ZDHHC12Q96GR4 267 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 TMEM237Q96Q45 408 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 MIPEPQ99797 713 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 NPPBP16860 134 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 ALDH3A1P30838 453 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 PPP2R2AP63151 447 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 SIM1P81133 766 aaPredicted RBP32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 TRIM73Q86UV7 250 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 MDM1Q8TC05 714 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 PAIP2Q9BPZ3 127 aaKnown RBP32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 OPTCQ9UBM4 332 aa32.11■■■□□ 2.73
CSNK1E-204ENST00000403904 KIF1CO43896 1103 aaKnown RBP32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 DHRS4L1P0CG22 281 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 SERPINB4P48594 390 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 WDR4P57081 412 aaKnown RBP32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 HERVK_113P63132 956 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 E2F1Q01094 437 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 SPIDRQ14159 915 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 TMEM71Q6P5X7 295 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 ZNF574Q6ZN55 896 aaPredicted RBP32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 ERVK-6Q9BXR3 956 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 SH2B3Q9UQQ2 575 aa32.1■■■□□ 2.73
CSNK1E-204ENST00000403904 WDR91A4D1P6 747 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 K7EPI3 171 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 BPGMP07738 259 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 IMPDH1P20839 514 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 HHATQ5VTY9 493 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 ICE2Q659A1 982 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 LCTLQ6UWM7 567 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 RPS27LQ71UM5 84 aaKnown RBP32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 LRRC70Q7Z2Q7 622 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 OR2L3Q8NG85 312 aa32.09■■■□□ 2.73
CSNK1E-204ENST00000403904 MAP3K3Q99759 626 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms