RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MXD1Q05195 221 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 STARD3Q14849 445 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 RFX4Q33E94 735 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 ARMCX4Q5H9R4 360 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 LINC00299Q6ZSB3 139 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 VTCN1Q7Z7D3 282 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 DTX3Q8N9I9 347 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 KBTBD8Q8NFY9 601 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 CDC26Q8NHZ8 85 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 OR52E6Q96RD3 313 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 FAM124BQ9H5Z6 455 aaPredicted RBP16.65■□□□□ 0.26
PTPRA-205ENST00000399903 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 E5RI56 91 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 J3KR12 359 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PCDHGA12O60330 932 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 WDR47O94967 919 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 SEMA3DO95025 777 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 ADRA1AP35348 466 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 RPP38P78345 283 aaKnown RBP16.65■□□□□ 0.26
PTPRA-205ENST00000399903 RAD51Q06609 339 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 SMARCB1Q12824 385 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 NOXA1Q86UR1 476 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 METTL23Q86XA0 190 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 C10orf111Q8N326 155 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 CAMKK1Q8N5S9 505 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 GTF2H4Q92759 462 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 NTAN1Q96AB6 310 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 NMUR1Q9HB89 426 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 GPR83Q9NYM4 423 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 PEX16Q9Y5Y5 336 aa16.65■□□□□ 0.26
PTPRA-205ENST00000399903 A0A0U1RQS6 177 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 SMLR1H3BR10 107 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 SLC16A6O15403 523 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 ARHGEF9O43307 516 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 YES1P07947 543 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 CYP2A7P20853 494 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 MGAT3Q09327 533 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 SLC10A7Q0GE19 358 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 MRNIPQ6NTE8 343 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 PRSS48Q7RTY5 328 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 CYP4Z2PQ8N1L4 340 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 BCL7BQ9BQE9 202 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 CRNNQ9UBG3 495 aaPredicted RBP16.64■□□□□ 0.25
PTPRA-205ENST00000399903 Q9Y3F1 56 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 KIAA0513O60268 411 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 TLR5O60602 858 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 TNFRSF21O75509 655 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 LRATO95237 230 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 SPATS1Q496A3 300 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 INTS6LQ5JSJ4 861 aaKnown RBP16.64■□□□□ 0.25
PTPRA-205ENST00000399903 LETMD1Q6P1Q0 360 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
PTPRA-205ENST00000399903 ARHGAP12Q8IWW6 846 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 ATAD1Q8NBU5 361 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 TSPEARQ8WU66 669 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 ISG20Q96AZ6 181 aaKnown RBP16.64■□□□□ 0.25
PTPRA-205ENST00000399903 CYP2S1Q96SQ9 504 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 SLC30A2Q9BRI3 323 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 LYVE1Q9Y5Y7 322 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 CDH23Q9H251 3354 aa16.64■□□□□ 0.25
PTPRA-205ENST00000399903 M0R082 166 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 TGM4P49221 684 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 GRPEL2Q8TAA5 225 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CNPPD1Q9BV87 410 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CLPBQ9H078 707 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CCNB1IP1Q9NPC3 277 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 SLC6A13Q9NSD5 602 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 PCDHGB1Q9Y5G3 927 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 A0A0U1RQF3 1178 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 EFCAB10A6NFE3 127 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 AKR7A2O43488 359 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CA12O43570 354 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 NDUFS3O75489 264 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CCNYL3P0C7X3 344 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 EFNA1P20827 205 aaPredicted RBP16.63■□□□□ 0.25
PTPRA-205ENST00000399903 AQP1P29972 269 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 OR3A3P47888 321 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 ERVPABLB-1P60509 514 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 IRF3Q14653 427 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CACHD1Q5VU97 1274 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CPZQ66K79 652 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 TUBA3EQ6PEY2 450 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 SPATA2LQ8IUW3 424 aaPredicted RBP16.63■□□□□ 0.25
PTPRA-205ENST00000399903 ZNF675Q8TD23 568 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 FCRL2Q96LA5 508 aaPredicted RBP16.63■□□□□ 0.25
PTPRA-205ENST00000399903 SLC9A7Q96T83 725 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 TMEM39AQ9NV64 488 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 PRRC2BQ5JSZ5 2229 aaKnown RBP16.63■□□□□ 0.25
PTPRA-205ENST00000399903 CLDN24A6NM45 220 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 PAGE1O75459 146 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 FDXRP22570 491 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 HNF4AP41235 474 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 SIRPB2Q5JXA9 342 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 PXDC1Q5TGL8 231 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 TMEM86AQ8N2M4 240 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 SIDT2Q8NBJ9 832 aaKnown RBP16.63■□□□□ 0.25
PTPRA-205ENST00000399903 BRINP2Q9C0B6 783 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 SP110Q9HB58 689 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 MUTYHQ9UIF7 546 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms