RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 VPS4AQ9UN37 437 aa13.63□□□□□ -0.23
APOB-202ENST00000399256 SAMD4AQ9UPU9 718 aaKnown RBP13.63□□□□□ -0.23
APOB-202ENST00000399256 PCDHGA3Q9Y5H0 932 aa13.63□□□□□ -0.23
APOB-202ENST00000399256 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 ULK1O75385 1050 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 BCKDHAP12694 445 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 FPR1P21462 350 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 CLCN7P51798 805 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 MAD2L1Q13257 205 aaPredicted RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 GRB14Q14449 540 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 PROX2Q3B8N5 592 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 TLK2Q86UE8 772 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 P3H2Q8IVL5 708 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 IL17RDQ8NFM7 739 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 NPLOC4Q8TAT6 608 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 SIGLEC11Q96RL6 698 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 SPON2Q9BUD6 331 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 IL1RAPQ9NPH3 570 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 C14orf119Q9NWQ9 140 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 GPRC5BQ9NZH0 403 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 ZNF221Q9UK13 617 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 PCDHGC4Q9Y5F7 938 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 N6AMT1Q9Y5N5 214 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 PATJQ8NI35 1801 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 A8MV72 311 aaPredicted RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 LRATO95237 230 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 FABP3P05413 133 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 GRK4P32298 578 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 S100A3P33764 101 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 SLC19A1P41440 591 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 ZNF45Q02386 682 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 NPRL3Q12980 569 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 MON1AQ86VX9 555 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 ELMOD1Q8N336 334 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 TNKS2Q9H2K2 1166 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 PDFQ9HBH1 243 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 VPS9D1Q9Y2B5 631 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 DLGAP4Q9Y2H0 992 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 PCDHGB6Q9Y5F9 930 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 SLC28A1O00337 649 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 ERN1O75460 977 aaKnown RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 FKBP9O95302 570 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 IL1RNP18510 177 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 NUDT6P53370 316 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 USP39Q53GS9 565 aaKnown RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 ATAD3CQ5T2N8 411 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 AGAP6Q5VW22 663 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 ZCCHC8Q6NZY4 707 aaKnown RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 AGAP4Q96P64 663 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 TSSK3Q96PN8 268 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 KCNC2Q96PR1 638 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 CHCHD6Q9BRQ6 235 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 FBXL12Q9NXK8 326 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 EHD3Q9NZN3 535 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 TMA7Q9Y2S6 64 aaKnown RBP13.62□□□□□ -0.23
APOB-202ENST00000399256 ZNF451Q9Y4E5 1061 aa13.62□□□□□ -0.23
APOB-202ENST00000399256 PDZK1P1A8MUH7 402 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 CCNDBP1O95273 360 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 MED26O95402 600 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 CXCR2P25025 360 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 RACK1P63244 317 aaKnown RBP13.61□□□□□ -0.23
APOB-202ENST00000399256 CYP4F2P78329 520 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 ADAMTSL2Q86TH1 951 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 HHIPL1Q96JK4 782 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 CDK5RAP1Q96SZ6 601 aaKnown RBP13.61□□□□□ -0.23
APOB-202ENST00000399256 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 CENPOQ9BU64 300 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 CINPQ9BW66 212 aaPredicted RBP13.61□□□□□ -0.23
APOB-202ENST00000399256 CEP44Q9C0F1 390 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 RNF38Q9H0F5 515 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 WWOXQ9NZC7 414 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 AP3M1Q9Y2T2 418 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 SLC12A8A0AV02 714 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 AP3D1O14617 1153 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 WNT9AO14904 365 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 STX7O15400 261 aaKnown RBP13.61□□□□□ -0.23
APOB-202ENST00000399256 PRLP01236 227 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 OR2B6P58173 313 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 PRKCDQ05655 676 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 ABHD18Q0P651 414 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 CAMK2GQ13555 558 aaPredicted RBP13.61□□□□□ -0.23
APOB-202ENST00000399256 TMC5Q6UXY8 1006 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 DMRTB1Q96MA1 342 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 THUMPD1Q9NXG2 353 aaKnown RBP13.61□□□□□ -0.23
APOB-202ENST00000399256 PTPRDP23468 1912 aa13.61□□□□□ -0.23
APOB-202ENST00000399256 LOC730098B7Z3J9 87 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 ZW10O43264 779 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 TPD52L2O43399 206 aaKnown RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 TLL1O43897 1013 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 MRPS14O60783 128 aaKnown RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 APOA1P02647 267 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms