RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PARS2Q7L3T8 475 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 EPHX4Q8IUS5 362 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MICU2Q8IYU8 434 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 EID3Q8N140 333 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 DHRSXQ8N5I4 330 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TSPAN14Q8NG11 270 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 WDR20Q8TBZ3 569 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SORCS1Q8WY21 1168 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SMG7Q92540 1137 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RAB7BQ96AH8 199 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 OSBPL10Q9BXB5 764 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PAIP1Q9H074 479 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 THG1LQ9NWX6 298 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FAM120CQ9NX05 1096 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MBD1Q9UIS9 605 aaPredicted RBP17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NEUROG3Q9Y4Z2 214 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HCFC2Q9Y5Z7 792 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 GMEB1Q9Y692 573 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 KCNE2Q9Y6J6 123 aa17.21■□□□□ 0.35
HLA-DQB1-204ENST00000399084 DOCK6Q96HP0 2047 aa17.21■□□□□ 0.34
HLA-DQB1-204ENST00000399084 KPNA3O00505 521 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 AREL1O15033 823 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TSPAN6O43657 245 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SDC1P18827 310 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 IRS1P35568 1242 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TMEM52BQ4KMG9 183 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 XKR6Q5GH73 641 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TMEM220Q6QAJ8 160 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PGBD3Q8N328 593 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SVOPLQ8N434 492 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 OR8J2Q8NGG1 315 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 REXO5Q96IC2 774 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ITM2CQ9NQX7 267 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SLC25A37Q9NYZ2 338 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 STOX2Q9P2F5 926 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DNAJB9Q9UBS3 223 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DLGAP4Q9Y2H0 992 aa17.2■□□□□ 0.34
HLA-DQB1-204ENST00000399084 OR2AG2A6NM03 316 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 EVPLLA8MZ36 301 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 VEGFDO43915 354 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MTX2O75431 263 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ZNF23P17027 643 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GRIA2P42262 883 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 KIR3DL1P43629 444 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CBX2Q14781 532 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CNPY1Q3B7I2 92 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PLA2G4EQ3MJ16 856 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ZNF658BQ4V348 819 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ERICH5Q6P6B1 374 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GPR149Q86SP6 731 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SERPINA11Q86U17 422 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 KRTCAP2Q8N6L1 136 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 OR10A6Q8NH74 314 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ZFP28Q8NHY6 868 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SMARCD2Q92925 531 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MTFMTQ96DP5 389 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 WDR34Q96EX3 536 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SPATA9Q9BWV2 254 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 EHD1Q9H4M9 534 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRPV4Q9HBA0 871 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRIM39Q9HCM9 518 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SERHLQ9NQF3 203 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SIRT5Q9NXA8 310 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GDE1Q9NZC3 331 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ADGRE2Q9UHX3 823 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DMTF1Q9Y222 760 aa17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ZFC3H1O60293 1989 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRIM64A6NGJ6 449 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 H3BM21 787 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CXCR6O00574 342 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DLGAP1O14490 977 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TPST1O60507 370 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 HOXB9P17482 250 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ITPKAP23677 461 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GSTT1P30711 240 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CAPGP40121 348 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ROR2Q01974 943 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GTF2H3Q13889 308 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SELPLGQ14242 412 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 C9orf64Q5T6V5 341 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PATL1Q86TB9 770 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MSRB3Q8IXL7 192 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ADAMTS16Q8TE57 1224 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ING5Q8WYH8 240 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PYCR2Q96C36 320 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SDCCAG3Q96C92 435 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CXorf40BQ96DE9 158 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM120BQ96EK7 910 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 LRRC3BQ96PB8 259 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SEPHS2Q99611 448 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CPPED1Q9BRF8 314 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRIM8Q9BZR9 551 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ATG10Q9H0Y0 220 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DPEP2Q9H4A9 486 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DYRK4Q9NR20 520 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DCAF13Q9NV06 445 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PCDHB14Q9Y5E9 798 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 A0A087WXM4 84 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms