RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EXT2Q93063 718 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PYCR2Q96C36 320 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC41A2Q96JW4 573 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HIST1H2AHQ96KK5 128 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TRAPPC9Q96Q05 1148 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 DEPDC7Q96QD5 511 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CD180Q99467 661 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MIPEPQ99797 713 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HIST1H2AJQ99878 128 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 H2AFJQ9BTM1 129 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ACAT2Q9BWD1 397 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZNF768Q9H5H4 540 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC6A20Q9NP91 592 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 INTS7Q9NVH2 962 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MKS1Q9NXB0 559 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NUDT4Q9NZJ9 180 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 LNPEPQ9UIQ6 1025 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PTBP2Q9UKA9 531 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KLHL20Q9Y2M5 609 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PCM1Q15154 2024 aa11.97□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KNTC1P50748 2209 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 AKAP13Q12802 2813 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 A0A0J9YY10 115 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CCDC189A1A4V9 331 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 LRRC14BA6NHZ5 514 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC9B1P1A6NJY1 282 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 AGRPO00253 132 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TOX3O15405 576 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HCRTR1O43613 425 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 GSTA1P08263 222 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ADRB1P08588 477 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ANXA5P08758 320 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MAGP20916 626 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 GGT5P36269 586 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HSD17B2P37059 387 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 GDF5P43026 501 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 GABRA4P48169 554 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PPM1FP49593 454 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 AGTR2P50052 363 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PRKAA1Q13131 559 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TRA2AQ13595 282 aaKnown RBP eCLIP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PTCHD3Q3KNS1 767 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CDKL4Q5MAI5 379 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CACHD1Q5VU97 1274 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KIAA1614Q5VZ46 1190 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FCRL6Q6DN72 434 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ARMC6Q6NXE6 501 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 LCA5Q86VQ0 697 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RAB42Q8N4Z0 105 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 BANPQ8N9N5 519 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 OR2L3Q8NG85 312 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ESAMQ96AP7 390 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PGM2Q96G03 612 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 LIN37Q96GY3 246 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PRR11Q96HE9 360 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TMEM74Q96NL1 305 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 EGFL8Q99944 293 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TRIM54Q9BYV2 358 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZMYND15Q9H091 742 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MRPL46Q9H2W6 279 aaKnown RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SYNPO2LQ9H987 977 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C1GALT1Q9NS00 363 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ARGLU1Q9NWB6 273 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZNF446Q9NWS9 450 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TAC3Q9UHF0 121 aa11.96□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HEATR5BQ9P2D3 2071 aa11.96□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MED19A0JLT2 244 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SUPT3HB4E1H0 165 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MAP2K7O14733 419 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HGSO14964 777 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RGS16O15492 202 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PRAMEF4O60810 478 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SUPT3HO75486 399 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PROCP04070 461 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RBP1P09455 135 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCL4P13236 92 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HGFP14210 728 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 JUPP14923 745 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NPPBP16860 134 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NELFEP18615 380 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 EPORP19235 508 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CDH3P22223 829 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ETV5P41161 510 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GRIA3P42263 894 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HSPA7P48741 367 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SEPHS1P49903 392 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SH3BP2P78314 561 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SETDB1Q15047 1291 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PRAMEF9Q5VWM5 478 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PRAMEF13Q5VWM6 474 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ICE2Q659A1 982 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SULT1C3Q6IMI6 304 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF425Q6IV72 752 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 KLC3Q6P597 504 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms