RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 EGFL8Q99944 293 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 TMEM121BQ9BXQ6 578 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 APMAPQ9HDC9 416 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 ZNF358Q9NW07 568 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 SIDT1Q9NXL6 827 aaKnown RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 TAC3Q9UHF0 121 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 C1QTNF9BB2RNN3 333 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 C1QTNF9P0C862 333 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 FOLR1P15328 257 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 KCNC1P48547 511 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 NAE1Q13564 534 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 TGFBIQ15582 683 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 ZIC1Q15915 447 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 FAM83EQ2M2I3 478 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 THEMIS2Q5TEJ8 643 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 KMT5CQ86Y97 462 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 GPSM1Q86YR5 675 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 CARFQ8N187 725 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 PYCR2Q96C36 320 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 SLC46A1Q96NT5 459 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 SLC39A1Q9NY26 324 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 RNF112Q9ULX5 631 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 PCDHB11Q9Y5F2 797 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 CELSR3Q9NYQ7 3312 aa24.45■■□□□ 1.5
TMEM55B-202ENST00000398020 TLDC2A0PJX2 215 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 KLHL2O95198 593 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 RBMS1P29558 406 aaKnown RBP24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 FOXK2Q01167 660 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 IFFO1Q0D2I5 559 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 CCDC91Q7Z6B0 441 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 CYP4X1Q8N118 509 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 C19orf47Q8N9M1 422 aaKnown RBP24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 OR2L3Q8NG85 312 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 USP7Q93009 1102 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 FBXL8Q96CD0 374 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 RNF31Q96EP0 1072 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 OR6C1Q96RD1 312 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 CCDC177Q9NQR7 707 aaPredicted RBP24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 PCMTD2Q9NV79 361 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 PCM1Q15154 2024 aa24.44■■□□□ 1.5
TMEM55B-202ENST00000398020 C18orf21Q32NC0 220 aaPredicted RBP24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 D2HGDHQ8N465 521 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 MZB1Q8WU39 189 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 GPR78Q96P69 363 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 FAM60AQ9NP50 221 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 ASCL3Q9NQ33 180 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 PLAAQ9Y263 795 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 GOLGA8RI6L899 631 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 ANXA5P08758 320 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 MLLT3P42568 568 aaPredicted RBP24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 MC2RQ01718 297 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 GPR19Q15760 415 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 FBXO48Q5FWF7 155 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 TIFABQ6ZNK6 161 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 TDRPQ86YL5 185 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 STAG3L4Q8TBR4 150 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 PPCSQ9HAB8 311 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 PDE7BQ9NP56 450 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 BTRCQ9Y297 605 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 IGF2RP11717 2491 aa24.43■■□□□ 1.5
TMEM55B-202ENST00000398020 A0A1W2PPM1 405 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 B4E171 279 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 NRP2O60462 931 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 TSPAN7P41732 249 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 GRIA3P42263 894 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 CDKL1Q00532 357 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 TUBB3Q13509 450 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 ICE2Q659A1 982 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 CDHR3Q6ZTQ4 885 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 ATL1Q8WXF7 558 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 ZBTB9Q96C00 473 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 SLC6A20Q9NP91 592 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 EURLQ9NYK6 297 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 CD274Q9NZQ7 290 aa24.42■■□□□ 1.5
TMEM55B-202ENST00000398020 C9orf172C9J069 976 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 CDH16O75309 829 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 ACAP2Q15057 778 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 DEFB110Q30KQ9 67 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 TMTC4Q5T4D3 741 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 PRAMEF13Q5VWM6 474 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 FCRL6Q6DN72 434 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 KLC3Q6P597 504 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 UNQ6494/PRO21346Q6UXR6 183 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 ATOH8Q96SQ7 321 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 MRPS30Q9NP92 439 aaKnown RBP24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 FGF21Q9NSA1 209 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 INTS7Q9NVH2 962 aaKnown RBP24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 FOXJ2Q9P0K8 574 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 B3GALT1Q9Y5Z6 326 aa24.41■■□□□ 1.5
TMEM55B-202ENST00000398020 UBXN8O00124 270 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 POLR1CO15160 346 aaPredicted RBP24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 MAP3K7O43318 606 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 HCRTR1O43613 425 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 KERAO60938 352 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 KRT15P19012 456 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 CMPK1P30085 196 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 PRDX1Q06830 199 aaKnown RBP24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 FIGLAQ6QHK4 219 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 CLEC14AQ86T13 490 aa24.4■■□□□ 1.5
TMEM55B-202ENST00000398020 LSMEM2Q8N112 164 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms