RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SH3BP5O60239 455 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TIMP2P16035 220 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 FMO4P31512 558 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF763Q0D2J5 394 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TOP3AQ13472 1001 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 OR4D1Q15615 310 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 METRNLQ641Q3 311 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ZCCHC12Q6PEW1 402 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SERPINA13PQ6UXR4 307 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SELENOMQ8WWX9 145 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RSC1A1Q92681 617 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM125Q96AQ2 219 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 MRPS17Q9Y2R5 130 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 HMBSP08397 361 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 FSHRP23945 695 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 DPP6P42658 865 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RPS21P63220 83 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM44Q2T9K0 475 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SDE2Q6IQ49 451 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 Q6ZVL8 140 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM25Q86YD3 366 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CHERPQ8IWX8 916 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PARP8Q8N3A8 854 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 FNDC5Q8NAU1 212 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 C11orf65Q8NCR3 313 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 OR9A1PQ8NGU1 263 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 WDR55Q9H6Y2 383 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF225Q9UK10 706 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 LIPT1Q9Y234 373 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CACNA1AO00555 2505 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 NEMP2A6NFY4 417 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 M0QX08 132 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PIP5K1BO14986 540 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 KRT36O76013 467 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ADRB3P13945 408 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ABL2P42684 1182 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ERVFC1P60507 584 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 GABARAPL2P60520 117 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RALGDSQ12967 914 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 AAK1Q2M2I8 961 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 MLIPQ5VWP3 458 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 AMZ2Q86W34 360 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ARMC8Q8IUR7 673 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 EME1Q96AY2 570 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SPATA5L1Q9BVQ7 753 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ANKRD19PQ9H560 264 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 KAT8Q9H7Z6 458 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 GALPQ9UBC7 116 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 IL36AQ9UHA7 158 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 HYKKA2RU49 373 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CDC7O00311 574 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SLC16A6O15403 523 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 BCKDHAP12694 445 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 NCF1P14598 390 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ARHGDIAP52565 204 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ESRRGP62508 458 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ADGRG5Q8IZF4 528 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF548Q8NEK5 533 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 FGF13Q92913 245 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TM6SF2Q9BZW4 377 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PALMDQ9NP74 551 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 DNAJB9Q9UBS3 223 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CHURC1-FNTBB4DL54 471 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SYT5O00445 386 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 UBFD1O14562 309 aaKnown RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 UPP2O95045 317 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 AK1P00568 194 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 HK3P52790 923 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PTCHD3Q3KNS1 767 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM214Q6NUQ4 689 aaKnown RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ABRAXAS1Q6UWZ7 409 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SLCO4C1Q6ZQN7 724 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 EEF1AKMT1Q8WVE0 214 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LZICQ8WZA0 190 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 AIF1LQ9BQI0 150 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 RACGAP1Q9H0H5 632 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TUBB1Q9H4B7 451 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ACTL8Q9H568 366 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ANKHQ9HCJ1 492 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 FBXL21Q9UKT6 434 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PCDHGB3Q9Y5G1 929 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 HS3ST3A1Q9Y663 406 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CCDC78A2IDD5 438 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PRORSD1PA6NEY8 169 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ANHXE9PGG2 379 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CCR7P32248 378 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 GATMP50440 423 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 GALNT3Q14435 633 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LRRK1Q38SD2 2015 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 RUNDC3AQ59EK9 446 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 C9orf64Q5T6V5 341 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CPZQ66K79 652 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PHF21BQ96EK2 531 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 BAG5Q9UL15 447 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LRRC72A6NJI9 287 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 AIM2O14862 343 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KCNH1O95259 989 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms