RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PROX1Q92786 737 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 FAM120BQ96EK7 910 aaKnown RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 UROC1Q96N76 676 aa13.56□□□□□ -0.24
NUP98-204ENST00000397004 TLR8Q9NR97 1041 aaKnown RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 THG1LQ9NWX6 298 aaKnown RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 EIF3LQ9Y262 564 aaKnown RBP13.56□□□□□ -0.24
NUP98-204ENST00000397004 A6NL46 340 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 A8MX80 341 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 H0Y626 953 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 INPPL1O15357 1258 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 ADAM12O43184 909 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 RGS14O43566 566 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 SCN2BO60939 215 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 TRIM16O95361 564 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 NUDT7P0C024 238 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 IL1RNP18510 177 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 COLEC12Q5KU26 742 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 OR4F3Q6IEY1 312 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 OR2T5Q6IEZ7 315 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 TAS1R1Q7RTX1 841 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 ADAMTSL2Q86TH1 951 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 FAM124AQ86V42 546 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 CCDC103Q8IW40 242 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 RAVER1Q8IY67 606 aaKnown RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 OR2T29Q8NH02 315 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 KLHL25Q9H0H3 589 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 IL26Q9NPH9 171 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 BTBD3Q9Y2F9 522 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 TNPO3Q9Y5L0 923 aaKnown RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 GMNNO75496 209 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 GATMP50440 423 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 WNT3P56703 355 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 ILF2Q12905 390 aaKnown RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 IL18R1Q13478 541 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 KEAP1Q14145 624 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 CTXN3Q4LDR2 81 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 KIAA1958Q8N8K9 716 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 TTC29Q8NA56 475 aaPredicted RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 WFDC5Q8TCV5 224 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 NTMT1Q9BV86 223 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 PDP1Q9P0J1 537 aaPredicted RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 FCF1Q9Y324 198 aaKnown RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 PCDHGA6Q9Y5G7 932 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 KCNE1BA0A087WTH5 132 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 MYO1GB0I1T2 1018 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 KDM1AO60341 852 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 GTF2E2P29084 291 aaKnown RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 NR4A2P43354 598 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 MAGEA11P43364 429 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 DGUOKQ16854 277 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 TRIM71Q2Q1W2 868 aaKnown RBP13.55□□□□□ -0.24
NUP98-204ENST00000397004 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 ADCK1Q86TW2 530 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 ABCB10Q9NRK6 738 aa13.55□□□□□ -0.24
NUP98-204ENST00000397004 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.55□□□□□ -0.24
NUP98-204ENST00000397004 GCM2O75603 506 aaPredicted RBP13.54□□□□□ -0.24
NUP98-204ENST00000397004 SEC24AO95486 1093 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 PPP5CP53041 499 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 RPP38P78345 283 aaKnown RBP13.54□□□□□ -0.24
NUP98-204ENST00000397004 CDKN3Q16667 212 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 ASIC5Q9NY37 505 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 GMPPBQ9Y5P6 360 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 DNTTP04053 509 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 HMGCLP35914 325 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 CLDN8P56748 225 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 RPS14P62263 151 aaKnown RBP13.54□□□□□ -0.24
NUP98-204ENST00000397004 LRIT3Q3SXY7 679 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 DEPDC1Q5TB30 811 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 LINC00299Q6ZSB3 139 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 SPATC1Q76KD6 591 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 ZSWIM9Q86XI8 627 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 ZZZ3Q8IYH5 903 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 GLB1L3Q8NCI6 653 aaPredicted RBP13.54□□□□□ -0.24
NUP98-204ENST00000397004 PIH1D2Q8WWB5 315 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 CDADC1Q9BWV3 514 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 RNF38Q9H0F5 515 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 AASDHPPTQ9NRN7 309 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 TTC36A6NLP5 189 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 EFCAB9A8MZ26 197 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 M0R129 80 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 RAD51BO15315 384 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 TBX1O43435 398 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 UPK1BO75841 260 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 GADD45AP24522 165 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 CACNG1Q06432 222 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 NFE2Q16621 373 aaPredicted RBP13.54□□□□□ -0.24
NUP98-204ENST00000397004 RNF219Q5W0B1 726 aaPredicted RBP13.54□□□□□ -0.24
NUP98-204ENST00000397004 PRSS48Q7RTY5 328 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 EGFL8Q99944 293 aa13.54□□□□□ -0.24
NUP98-204ENST00000397004 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 METTL15A6NJ78 407 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 RGS10O43665 173 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 DUSP11O75319 330 aaKnown RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 CDH4P55283 916 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms