RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CCDC88AQ3V6T2 1871 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 WASHC1A8K0Z3 465 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 WASH3PC4AMC7 463 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 AGR2O95994 175 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 WASH2PQ6VEQ5 465 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 YIPF7Q8N8F6 280 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 BANPQ8N9N5 519 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 MRPS30Q9NP92 439 aaKnown RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 FARSAQ9Y285 508 aaKnown RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 DUXAA6NLW8 204 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 LINC00471Q8N535 108 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ADAD1Q96M93 576 aaKnown RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 PCDHAC1Q9H158 963 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 UBIAD1Q9Y5Z9 338 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA31A5Q5VU36 1347 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA31A7Q8IWB4 1347 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 FOXO6A8MYZ6 492 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ESR1P03372 595 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 EFNA1P20827 205 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 GRIA1P42261 906 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 XKRXQ6PP77 449 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 FBXO15Q8NCQ5 510 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 HCAR2Q8TDS4 363 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 HMCESQ96FZ2 354 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM209Q96SK2 561 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 OSBPL7Q9BZF2 842 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 MCCC2Q9HCC0 563 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 M0R129 80 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 CD52P31358 61 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ADGRD2Q7Z7M1 963 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 CCDC28AQ8IWP9 274 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF709Q8N972 641 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 MTERF1Q99551 399 aaKnown RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 WACQ9BTA9 647 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 AURKAO14965 403 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 CCR8P51685 355 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 FKBP1CQ5VVH2 108 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 BARD1Q99728 777 aaKnown RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 PBX3P40426 434 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 CDK10Q15131 360 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 TSTD2Q5T7W7 516 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ABHD13Q7L211 337 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 PPTC7Q8NI37 304 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 FAM83DQ9H4H8 585 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 OR1D2P34982 312 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ACADVLP49748 655 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 SLC18A2Q05940 514 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 TSTQ16762 297 aaKnown RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 ARSKQ6UWY0 536 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 TCEAL3Q969E4 200 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 EVLQ9UI08 416 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-202ENST00000396578 PADI2Q9Y2J8 665 aa13.68□□□□□ -0.22
COL4A3-202ENST00000396578 TECPR2O15040 1411 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 IFNA2P01563 188 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ZFPM1Q8IX07 1006 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ITGA5P08648 1049 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 PSMA6P60900 246 aaKnown RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SPIN4Q56A73 249 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ARL9Q6T311 187 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM145Q8NBT3 493 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 OR14C36Q8NHC7 312 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 TUBA1CQ9BQE3 449 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 B8ZZF3 427 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 PCDH7O60245 1069 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 CXCL14O95715 111 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 S100PP25815 95 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 BNIP3Q12983 259 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 LNX2Q8N448 690 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 HTATIP2Q9BUP3 242 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 FAM124BQ9H5Z6 455 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SLC39A1Q9NY26 324 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 TAS2R3Q9NYW6 316 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 GLUD1P00367 558 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ENPP2Q13822 863 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF267Q14586 743 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 HSD17B12Q53GQ0 312 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 IL4I1Q96RQ9 567 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 KLF15Q9UIH9 416 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ERVW-1Q9UQF0 538 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 LRRC42Q9Y546 428 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SAP18O00422 153 aaKnown RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SRPRAP08240 638 aaKnown RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SEC23BQ15437 767 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms