RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PRAMEF13Q5VWM6 474 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ENPP7Q6UWV6 458 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 AMIGO1Q86WK6 493 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 FBXO15Q8NCQ5 510 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SLC35F5Q8WV83 523 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ARNTL2Q8WYA1 636 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CNDP2Q96KP4 475 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 KCTD7Q96MP8 289 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 EPYCQ99645 322 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TRMT61BQ9BVS5 477 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ANKRA2Q9H9E1 313 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MOV10Q9HCE1 1003 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 NLGN3Q9NZ94 848 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ACTR3BQ9P1U1 418 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SALL4Q9UJQ4 1053 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PHF24Q9UPV7 400 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 hCG_2039718K7EN88 272 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ITGA10O75578 1167 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 KCNE1P15382 129 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 FSHRP23945 695 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CASP9P55211 416 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SEC13P55735 322 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ST3GAL3Q11203 375 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CBFBQ13951 182 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SCARB2Q14108 478 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ALKBH2Q6NS38 261 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 KLHL36Q8N4N3 616 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SH3RF2Q8TEC5 729 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PNPLA2Q96AD5 504 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 C1orf74Q96LT6 269 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 JSRP1Q96MG2 331 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 BCO2Q9BYV7 579 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 C11orf16Q9NQ32 467 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TBC1D24Q9ULP9 559 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 H0YGN5 161 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CPNE3O75131 537 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 KLK3P07288 261 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 HSD11B1P28845 292 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ACSL1P33121 698 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MAP3K8P41279 467 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MTTPP55157 894 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MERTKQ12866 999 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PRPF38BQ5VTL8 546 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SLC8B1Q6J4K2 584 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 IQCF2Q8IXL9 164 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PPP1R14BQ96C90 147 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CYP2S1Q96SQ9 504 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SLC35A5Q9BS91 424 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 IKZF4Q9H2S9 585 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MKS1Q9NXB0 559 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 RIMKLBQ9ULI2 386 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 FZD4Q9ULV1 537 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SPIN1Q9Y657 262 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 DAPL1A0PJW8 107 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ELOA3DA6NLF2 546 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MID1O15344 667 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 HMGN1P05114 100 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ITIH1P19827 911 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 S100A1P23297 94 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CXCR1P25024 350 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 DSTNP60981 165 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TUBA1BP68363 451 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TUBA4AP68366 448 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ABATP80404 500 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ARHGAP1Q07960 439 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ELOA3BQ3SY89 546 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF783Q6ZMS7 281 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TUBA1AQ71U36 451 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TMCO2Q7Z6W1 182 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ELOA3Q8NG57 546 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SLC35B2Q8TB61 432 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 OVCA2Q8WZ82 227 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TP53INP1Q96A56 240 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 CEP295NLQ96MC4 621 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 IFT27Q9BW83 186 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 COQ10BQ9H8M1 238 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TBC1D17Q9HA65 648 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 NDRG2Q9UN36 371 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 DDX60Q8IY21 1712 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 LOC100130705A0A1B0GUX0 176 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 TSPAN9O75954 239 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 KAT7O95251 611 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 OAS1P00973 400 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 MYCLP1P12525 358 aaPredicted RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PUM1Q14671 1186 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 SH3D19Q5HYK7 790 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PACRGLQ8N7B6 248 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 NAT14Q8WUY8 206 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 YTHDF1Q9BYJ9 559 aaKnown RBP5.33□□□□□ -1.56
VPS13C-204ENST00000395898 VIPR1P32241 457 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 NRIP1P48552 1158 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 RIPPLY1Q0D2K3 151 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 GPM6BQ13491 265 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 NCBP2-AS2Q69YL0 99 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PAOXQ6QHF9 649 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 PAQR3Q6TCH7 311 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 IQCHQ86VS3 1027 aa5.33□□□□□ -1.56
VPS13C-204ENST00000395898 ARMC10Q8N2F6 343 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms