RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SLC25A51Q9H1U9 297 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 ARNT2Q9HBZ2 717 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 PADI3Q9ULW8 664 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 KLK4Q9Y5K2 254 aa18.4■□□□□ 0.54
HOXC6-202ENST00000394331 A0A0U1RQF3 1178 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 WASH4PA8MWX3 477 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 ANKRD28O15084 1053 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 TYMPP19971 482 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 MSH3P20585 1137 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 CFL1P23528 166 aaKnown RBP18.39■□□□□ 0.54
HOXC6-202ENST00000394331 FOXA1P55317 472 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 WNT3AP56704 352 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 UFM1P61960 85 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 LILRB1Q8NHL6 650 aaPredicted RBP18.39■□□□□ 0.54
HOXC6-202ENST00000394331 HASPINQ8TF76 798 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 CEP19Q96LK0 163 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 SERPINB11Q96P15 392 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 PIF1Q9H611 641 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 DYRK4Q9NR20 520 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 NDFIP2Q9NV92 336 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 TEKT2Q9UIF3 430 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 SNX7Q9UNH6 387 aa18.39■□□□□ 0.54
HOXC6-202ENST00000394331 OR6C70A6NIJ9 312 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 TNFRSF10BO14763 440 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 LAPTM5Q13571 262 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 XKR7Q5GH72 579 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 MLIPQ5VWP3 458 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 AMIGO1Q86WK6 493 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 ZNF548Q8NEK5 533 aaPredicted RBP18.39■□□□□ 0.53
HOXC6-202ENST00000394331 SUSD3Q96L08 255 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 C1orf74Q96LT6 269 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 PITX2Q99697 317 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 RHNO1Q9BSD3 238 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 TTLL2Q9BWV7 592 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 ERVK13-1Q9NX77 482 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 TLL1O43897 1013 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 EPN2O95208 641 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 LINC00032P0C843 101 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 PRKACAP17612 351 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 PRKACGP22612 351 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 CBLP22681 906 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 CD52P31358 61 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 MAPK12P53778 367 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 PRKG2Q13237 762 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 FAM219BQ5XKK7 198 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 KDM4DQ6B0I6 523 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 FBXO30Q8TB52 745 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 TRNT1Q96Q11 434 aaKnown RBP18.39■□□□□ 0.53
HOXC6-202ENST00000394331 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 LIMD1Q9UGP4 676 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 ADGRE2Q9UHX3 823 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 INVSQ9Y283 1065 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 HS3ST4Q9Y661 456 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
HOXC6-202ENST00000394331 CCDC182A6NF36 153 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 E9PQ18 207 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 MUSKO15146 869 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 SEC14L5O43304 696 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
HOXC6-202ENST00000394331 RENBPP51606 427 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 BAMBIQ13145 260 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 PWP1Q13610 501 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 MFSD13AQ14CX5 517 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 ARTNQ5T4W7 220 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 OR2T12Q8NG77 320 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 OR10Z1Q8NGY1 313 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 TOE1Q96GM8 510 aaKnown RBP18.38■□□□□ 0.53
HOXC6-202ENST00000394331 TM9SF2Q99805 663 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 ALG9Q9H6U8 611 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.38■□□□□ 0.53
HOXC6-202ENST00000394331 KLHL20Q9Y2M5 609 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 AP3M1Q9Y2T2 418 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 SLC35F4A4IF30 521 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 PFKLP17858 780 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 CD72P21854 359 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 CASP2P42575 452 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 CHRNA4P43681 627 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 ERVK-8P63133 956 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 RIPPLY1Q0D2K3 151 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 HYAL2Q12891 473 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 PRSS36Q5K4E3 855 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 KDELC1Q6UW63 502 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 KDELC2Q7Z4H8 507 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 CYP4Z1Q86W10 505 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 GLB1L3Q8NCI6 653 aaPredicted RBP18.38■□□□□ 0.53
HOXC6-202ENST00000394331 ANKRD49Q8WVL7 239 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 RAD9AQ99638 391 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 ZSCAN5AQ9BUG6 496 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 PLCXD1Q9NUJ7 323 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 MPP6Q9NZW5 540 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 PCDHB5Q9Y5E4 795 aa18.38■□□□□ 0.53
HOXC6-202ENST00000394331 OR2B3O76000 313 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 SLC2A3P11169 496 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 MYL9P24844 172 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 DNAJA4Q8WW22 397 aaPredicted RBP18.37■□□□□ 0.53
HOXC6-202ENST00000394331 FATE1Q969F0 183 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 WDFY2Q96P53 400 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 NEUROG3Q9Y4Z2 214 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 KCNE2Q9Y6J6 123 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms