RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 E9PAM4 449 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ZW10O43264 779 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 NOBOXO60393 691 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 SNX2O60749 519 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 PAPSS2O95340 614 aaPredicted RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 C1RP00736 705 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 PRR35P0CG20 571 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 PCNAP12004 261 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 HOXB8P17481 243 aaPredicted RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 CEBPBP17676 345 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CORO1AP31146 461 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 DDOSTP39656 456 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 MAP2K4P45985 399 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 KCNC1P48547 511 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 MASP1P48740 699 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 EPHA5P54756 1037 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DIO3P55073 304 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 MRPS15P82914 257 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 HSPA14Q0VDF9 509 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 POU6F1Q14863 301 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 PCSK7Q16549 785 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DUSP7Q16829 419 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 RFX4Q33E94 735 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CDONQ4KMG0 1287 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CEP78Q5JTW2 689 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 PRSS36Q5K4E3 855 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 COLEC12Q5KU26 742 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ARHGAP36Q6ZRI8 547 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ISCA2Q86U28 154 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 RALGPS2Q86X27 583 aaPredicted RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 SLC22A15Q8IZD6 547 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 AADATQ8N5Z0 425 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 NATD1Q8N6N6 113 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 BEND7Q8N7W2 519 aaPredicted RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 OR52K2Q8NGK3 314 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ZNF419Q96HQ0 510 aaPredicted RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 LRRC3BQ96PB8 259 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DEPDC7Q96QD5 511 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 TMEM246Q9BRR3 403 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 FICDQ9BVA6 458 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DCSTAMPQ9H295 470 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ARNT2Q9HBZ2 717 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 INTS7Q9NVH2 962 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 AGO1Q9UL18 857 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 PTGDR2Q9Y5Y4 395 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ZSCAN5BA6NJL1 495 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 EFCAB9A8MZ26 197 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 TMCC2O75069 709 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 APOA1P02647 267 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CKMP06732 381 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 GGT5P36269 586 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CDH13P55290 713 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DEFA1P59665 94 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DEFA3P59666 94 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 RPS24P62847 133 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 TRAF3Q13114 568 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ZFP69Q49AA0 526 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CES5AQ6NT32 575 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 SYCE2Q6PIF2 218 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 RANBP10Q6VN20 620 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 PARP16Q8N5Y8 322 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 DPP10Q8N608 796 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 CELF2-AS1Q8N7Q2 184 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ANKRD49Q8WVL7 239 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 RPL3LQ92901 407 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 TEX37Q96LM6 180 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 GORASP2Q9H8Y8 452 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 ACOT13Q9NPJ3 140 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 OLA1Q9NTK5 396 aaKnown RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 AIG1Q9NVV5 245 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 FBXL12Q9NXK8 326 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 UXTQ9UBK9 157 aaPredicted RBP10.86□□□□□ -0.67
CUX1-204ENST00000393824 GPSM3Q9Y4H4 160 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 HSPE1-MOB4S4R3N1 261 aa10.86□□□□□ -0.67
CUX1-204ENST00000393824 C2orf16Q68DN1 1984 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 MATN3O15232 486 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CST1P01037 141 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CYBBP04839 570 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 ITGAMP11215 1152 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 GGT1P19440 569 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 PSMB9P28065 219 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 TGFBR2P37173 567 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 FOXA1P55317 472 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 OR2B6P58173 313 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 GPR158Q5T848 1215 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 PDE12Q6L8Q7 609 aaKnown RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 ERAP2Q6P179 960 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 GALNT12Q8IXK2 581 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SETD9Q8NE22 299 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 IPMKQ8NFU5 416 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SPATA22Q8NHS9 363 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CNIH3Q8TBE1 160 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 ST6GAL2Q96JF0 529 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 DHRS9Q9BPW9 319 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 BRINP2Q9C0B6 783 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 C12orf10Q9HB07 376 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 MID1IP1Q9NPA3 183 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 DDX28Q9NUL7 540 aaKnown RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 DENND4CQ5VZ89 1909 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 FAM25AB3EWG3 89 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms