RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 UHMK1Q8TAS1 419 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 ACAT2Q9BWD1 397 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 ULBP3Q9BZM4 244 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 DERL2Q9GZP9 239 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 FAM60AQ9NP50 221 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 ARL15Q9NXU5 204 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 STOX2Q9P2F5 926 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 CTNNAL1Q9UBT7 734 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 PILRAQ9UKJ1 303 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 KLHL20Q9Y2M5 609 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 SNRNP200O75643 2136 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 ADAMTS20P59510 1910 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 SDK2Q58EX2 2172 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 TMEM150CB9EJG8 249 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 CDC7O00311 574 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 RAD1O60671 282 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 KIAA0754O94854 1291 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 CCNDBP1O95273 360 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 WISP3O95389 354 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 CCDC166P0CW27 439 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 TNFRSF8P28908 595 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 DEKP35659 375 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 GRIA3P42263 894 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 MSH2P43246 934 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 TGIF1Q15583 401 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 ZKSCAN8Q15776 578 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 THEMIS2Q5TEJ8 643 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 MROH9Q5TGP6 573 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 PWWP2BQ6NUJ5 590 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 AGTRAPQ6RW13 159 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 NLGN4XQ8N0W4 816 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 DNAJC22Q8N4W6 341 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 NLGN4YQ8NFZ3 816 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 HNRNPLLQ8WVV9 542 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 SLC44A1Q8WWI5 657 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 ATL1Q8WXF7 558 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 ABCF3Q9NUQ8 709 aa18.28■□□□□ 0.52
PDLIM7-204ENST00000393546 EPG5Q9HCE0 2579 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 NPEPPSL1A6NEC2 478 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 POC1B-GALNT4F8VUJ3 575 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ABHD2P08910 425 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ZNF28P17035 718 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ITPKBP27987 946 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 SERPINB9P50453 376 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ITGA1P56199 1179 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ATP6V0D1P61421 351 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ABATP80404 500 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 PRDX1Q06830 199 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ZC3H12BQ5HYM0 836 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 FCRL6Q6DN72 434 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 SBSNQ6UWP8 590 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 C6orf15Q6UXA7 325 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 MBOAT1Q6ZNC8 495 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 TAOK1Q7L7X3 1001 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ADAMTSL2Q86TH1 951 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 TMEM126BQ8IUX1 230 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 LRRC56Q8IYG6 542 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 CACNA2D3Q8IZS8 1091 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 IL22RA1Q8N6P7 574 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 OR1L3Q8NH93 324 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 NKD1Q969G9 470 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 PCBD2Q9H0N5 130 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 ANKZF1Q9H8Y5 726 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 MRPS30Q9NP92 439 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 CCDC177Q9NQR7 707 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 TAC3Q9UHF0 121 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 IKZF3Q9UKT9 509 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 PLCL2Q9UPR0 1127 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 KLK4Q9Y5K2 254 aa18.27■□□□□ 0.52
PDLIM7-204ENST00000393546 USP24Q9UPU5 2620 aa18.27■□□□□ 0.51
PDLIM7-204ENST00000393546 RIPK2O43353 540 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 SCRG1O75711 98 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TIAF1O95411 115 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 GUCA1CO95843 209 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 DLGAP3O95886 979 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 MT-ND3P03897 115 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 CCNYL3P0C7X3 344 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 CCND1P24385 295 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TLE3Q04726 772 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 NAE1Q13564 534 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 BMPR2Q13873 1038 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 MAP7Q14244 749 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TSNQ15631 228 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 MANEAQ5SRI9 462 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 ICE2Q659A1 982 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 FRA10AC1Q70Z53 315 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TIPARPQ7Z3E1 657 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 CCDC91Q7Z6B0 441 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 CMC1Q7Z7K0 106 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TBC1D1Q86TI0 1168 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 MCATQ8IVS2 390 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 GSPT2Q8IYD1 628 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 GPR135Q8IZ08 494 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 SPATA6LQ8N4H0 392 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 ESX1Q8N693 406 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 FBXL8Q96CD0 374 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 MED8Q96G25 268 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 UBXN10Q96LJ8 280 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 PAFAH2Q99487 392 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms