RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 GTF2IRD2BQ6EKJ0 949 aa16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 ZNF613Q6PF04 617 aa16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 GTF2IRD2Q86UP8 949 aa16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 DYNC2LI1Q8TCX1 351 aa16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 PTCD2Q8WV60 388 aaKnown RBP16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 IPCEF1Q8WWN9 437 aaPredicted RBP16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 FAM129BQ96TA1 746 aa16.59■□□□□ 0.25
TRAF3IP1-202ENST00000391993 BCORQ6W2J9 1755 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 H3BRB1 525 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 PLSCR1O15162 318 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 OTCP00480 354 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 TGM4P49221 684 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 DEFA5Q01523 94 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 CSTF1Q05048 431 aaKnown RBP16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 GRM1Q13255 1194 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 KYAT1Q16773 422 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 MFSD4AQ8N468 514 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 ZFP41Q8N8Y5 198 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 PAPD5Q8NDF8 572 aaKnown RBP16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 EEF1AKMT1Q8WVE0 214 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 HSH2DQ96JZ2 352 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 ZFP3Q96NJ6 502 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 TLR8Q9NR97 1041 aaKnown RBP16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 GSTK1Q9Y2Q3 226 aa16.58■□□□□ 0.25
TRAF3IP1-202ENST00000391993 PDPK1O15530 556 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MYL3P08590 195 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ITGALP20701 1170 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CD72P21854 359 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 RHAGQ02094 409 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SEMG2Q02383 582 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PAFAH1B3Q15102 231 aaKnown RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GPR68Q15743 365 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 C10orf62Q5T681 223 aaPredicted RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 C11orf96Q7Z7L8 435 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 OR10G2Q8NGC3 310 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SCAMP5Q8TAC9 235 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DOK1Q99704 481 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SLA2Q9H6Q3 261 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FBXW11Q9UKB1 542 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 A0A1B0GTL3 188 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FPGTO14772 594 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 IRF1P10914 325 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 JUNBP17275 347 aaPredicted RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ERP29P30040 261 aaKnown RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FEN1P39748 380 aaKnown RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 HTR3AP46098 478 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CCL23P55773 120 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ISL1P61371 349 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ZXDBP98169 803 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 C2orf80Q0P641 193 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 BOP1Q14137 746 aaKnown RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 C12orf42Q96LP6 360 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 UHRF1Q96T88 793 aaPredicted RBP16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 COPS8Q99627 209 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CCM2Q9BSQ5 444 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MYOZ2Q9NPC6 264 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SMPD4Q9NXE4 827 aa16.58■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PRAMEF1O95521 474 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 EPB42P16452 691 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CTPS1P17812 591 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GGT1P19440 569 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 KIR3DL1P43629 444 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MAD2L1Q13257 205 aaPredicted RBP16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 UGT3A2Q3SY77 523 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ZMAT1Q5H9K5 638 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 LRRC66Q68CR7 880 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GALNT7Q86SF2 657 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CYP4Z2PQ8N1L4 340 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FCGR1BQ92637 280 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 VMP1Q96GC9 406 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 HDHD5Q9BXW7 423 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 TTYH1Q9H313 450 aaPredicted RBP16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 INMT-MINDY4F8WBC2 141 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DHFRP00374 187 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 POMCP01189 267 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MC4RP32245 332 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GSTM5P46439 218 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 C11orf88Q6PI97 169 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 LAX1Q8IWV1 398 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 OR6K2Q8NGY2 324 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NIFKQ9BYG3 293 aaKnown RBP16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SLAMF7Q9NQ25 335 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SLC35C2Q9NQQ7 365 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DNMT3LQ9UJW3 386 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PLCH1Q4KWH8 1693 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SOCS7O14512 581 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 EEDO75530 441 aaKnown RBP16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ITPKAP23677 461 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CAV3P56539 151 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GTF2H2Q13888 395 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ZNF691Q5VV52 312 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MFSD14CQ5VZR4 134 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 C22orf42Q6IC83 251 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GTF2H2CQ6P1K8 395 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 LGI4Q8N135 537 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FZD8Q9H461 694 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms