RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CCR5P51681 352 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 PNLIPRP1P54315 467 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 YBX1P67809 324 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CTBSQ01459 385 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CUL3Q13618 768 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 DOC2AQ14183 400 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SQLEQ14534 574 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 NR6A1Q15406 480 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 AGKQ53H12 422 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ZNF542PQ5EBM4 170 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 LAYNQ6UX15 382 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 FNDC5Q8NAU1 212 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 NEIL2Q969S2 332 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SPDL1Q96EA4 605 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ACAT2Q9BWD1 397 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CHRDQ9H2X0 955 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 TBC1D29Q9UFV1 150 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CCL27Q9Y4X3 112 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 HS3ST3A1Q9Y663 406 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CEP192Q8TEP8 1941 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 FRYLO94915 3013 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 HEATR5BQ9P2D3 2071 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 PSMD12O00232 456 aaPredicted RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 LSM1O15116 133 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 HNRNPCL1O60812 293 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 VPS4BO75351 444 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ZNF217O75362 1048 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 FESP07332 822 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 NPPBP16860 134 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 KELP23276 732 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SRP54P61011 504 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CYLC2Q14093 348 aaPredicted RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ALG11Q2TAA5 492 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ATP6AP1LQ52LC2 224 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CATSPEREQ5SY80 951 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ADNP2Q6IQ32 1131 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 CAPN13Q6MZZ7 669 aaPredicted RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SLC30A9Q6PML9 568 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 ABI3BPQ7Z7G0 1075 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SPEM1Q8N4L4 309 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 L3MBTL4Q8NA19 623 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 SELENOMQ8WWX9 145 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 TRIT1Q9H3H1 467 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 TCEAL2Q9H3H9 227 aaPredicted RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 DENND2DQ9H6A0 471 aaPredicted RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 RIC8BQ9NVN3 520 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 BDP1A6H8Y1 2624 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 TRBV23OR9-2A0A075B6M9 112 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 AIM2O14862 343 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 ENTPD5O75356 428 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 PDGFBP01127 241 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 GPX3P22352 226 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 MAOBP27338 520 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 CPOXP36551 454 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 PTK2BQ14289 1009 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 AP5B1Q2VPB7 878 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 RFTN2Q52LD8 501 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 THEMIS2Q5TEJ8 643 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 TMPRSS11BQ86T26 416 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 KLHDC8AQ8IYD2 350 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 UBALD2Q8IYN6 164 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 RGL4Q8IZJ4 473 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 USP7Q93009 1102 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 CLDN23Q96B33 292 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 RCN3Q96D15 328 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 SLC6A18Q96N87 628 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 SGPP1Q9BX95 441 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 SLC29A3Q9BZD2 475 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 ELOVL6Q9H5J4 265 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 XKR8Q9H6D3 395 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 SIT1Q9Y3P8 196 aa11.8□□□□□ -0.52
SPTBN1-203ENST00000389980 A0A1W2PPC4 97 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 H0Y3Z8 333 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 NDUFS2O75306 463 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 SMNDC1O75940 238 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 ANP32DO95626 131 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 KRT6AP02538 564 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 KRT6BP04259 564 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 THEGLP0DJG4 465 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 THRAP10827 490 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 PSMB5P28074 263 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 PRDX6P30041 224 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 ACTR1BP42025 376 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 KRT6CP48668 564 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 ACTR1AP61163 376 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 STX1BP61266 288 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 YPEL5P62699 121 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 MEF2AQ02078 507 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 IMPG1Q17R60 797 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 UAP1L1Q3KQV9 507 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 GGTA1PQ4G0N0 100 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 OGFOD2Q6N063 350 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 TBC1D21Q8IYX1 336 aa11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 RP9Q8TA86 221 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-203ENST00000389980 NUDT8Q8WV74 236 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms