RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 SOX17Q9H6I2 414 aaPredicted RBP25.29■■□□□ 1.64
NPHP3-202ENST00000383282 ZBTB20Q9HC78 741 aaPredicted RBP25.29■■□□□ 1.64
NPHP3-202ENST00000383282 SEMA3GQ9NS98 782 aa25.29■■□□□ 1.64
NPHP3-202ENST00000383282 SLC5A6Q9Y289 635 aa25.29■■□□□ 1.64
NPHP3-202ENST00000383282 PCDHGA10Q9Y5H3 936 aa25.29■■□□□ 1.64
NPHP3-202ENST00000383282 HS3ST3B1Q9Y662 390 aa25.29■■□□□ 1.64
NPHP3-202ENST00000383282 NFS1Q9Y697 457 aa25.29■■□□□ 1.64
NPHP3-202ENST00000383282 NBPF19A0A087WUL8 3843 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 FITM1A5D6W6 292 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 SOCS6O14544 535 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 C1orf105O95561 183 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 ZSCAN5DPP0CG00 497 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 RPL22P35268 128 aaKnown RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 EIF3BP55884 814 aaKnown RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 VSX2P58304 361 aaPredicted RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 BASP1P80723 227 aaKnown RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 CCZ1BP86790 482 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 CCZ1P86791 482 aaPredicted RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 NAA25Q14CX7 972 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 TUBB8Q3ZCM7 444 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 CUZD1Q86UP6 607 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 INPP5DQ92835 1189 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 C5orf34Q96MH7 638 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 MIPEPQ99797 713 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 TREX1Q9NSU2 369 aa25.28■■□□□ 1.64
NPHP3-202ENST00000383282 ERRFI1Q9UJM3 462 aaPredicted RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 SNRNP200O75643 2136 aaKnown RBP25.28■■□□□ 1.64
NPHP3-202ENST00000383282 CCDC88CQ9P219 2028 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 PFDN6O15212 129 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 PRICKLE3O43900 615 aaPredicted RBP25.27■■□□□ 1.64
NPHP3-202ENST00000383282 ALOX12BO75342 701 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 OR1D4P47884 311 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 NPY2RP49146 381 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 CRADDP78560 199 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 RPS6KA1Q15418 735 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 CCNG2Q16589 344 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 CRB2Q5IJ48 1285 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 WASHC2DQ5SRD0 308 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 SHISA6Q6ZSJ9 500 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 LURAP1LQ8IV03 231 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 METTL27Q8N6F8 245 aaPredicted RBP25.27■■□□□ 1.64
NPHP3-202ENST00000383282 HMGCLL1Q8TB92 370 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 EPS8L2Q9H6S3 715 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 SPATA7Q9P0W8 599 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 CTSFQ9UBX1 484 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 MAU2Q9Y6X3 613 aa25.27■■□□□ 1.64
NPHP3-202ENST00000383282 CTSVO60911 334 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 PSMB5P28074 263 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 MRNIPQ6NTE8 343 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 CNSTQ6PJW8 725 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 KIRREL2Q6UWL6 708 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 GSTA5Q7RTV2 222 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 MAMDC2Q7Z304 686 aaPredicted RBP25.26■■□□□ 1.63
NPHP3-202ENST00000383282 SDCCAG8Q86SQ7 713 aaPredicted RBP25.26■■□□□ 1.63
NPHP3-202ENST00000383282 PARP9Q8IXQ6 854 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 OR2L3Q8NG85 312 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 LHPPQ9H008 270 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 ZNF304Q9HCX3 659 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 NOVA2Q9UNW9 492 aaKnown RBP25.26■■□□□ 1.63
NPHP3-202ENST00000383282 DRG1Q9Y295 367 aaKnown RBP25.26■■□□□ 1.63
NPHP3-202ENST00000383282 KLK4Q9Y5K2 254 aa25.26■■□□□ 1.63
NPHP3-202ENST00000383282 ANKRD12Q6UB98 2062 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 PRRC2CQ9Y520 2896 aaKnown RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 A0A0J9YVX5 310 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 HYKKA2RU49 373 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 LDLRP01130 860 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 CCDC175P0C221 793 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 ERVK-10P10266 1014 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 NMBRP28336 390 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 CARSP49589 748 aaKnown RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 OCA2Q04671 838 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 HIF1AQ16665 826 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 PRMT9Q6P2P2 845 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 DRICH1Q6PGQ1 229 aaPredicted RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 IGFL2Q6UWQ7 119 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 DNAJB14Q8TBM8 379 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 BARD1Q99728 777 aaKnown RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 CRB3Q9BUF7 120 aa25.25■■□□□ 1.63
NPHP3-202ENST00000383282 ZC3H7BQ9UGR2 993 aaKnown RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 RUVBL2Q9Y230 463 aaKnown RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 UTP20O75691 2785 aaKnown RBP25.25■■□□□ 1.63
NPHP3-202ENST00000383282 WIPF3A6NGB9 483 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 VSTM2BA6NLU5 285 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 H3BMM5 538 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 CCSMST1Q4G0I0 132 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 RNF187Q5TA31 235 aaPredicted RBP25.24■■□□□ 1.63
NPHP3-202ENST00000383282 MEI1Q5TIA1 1274 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 MAIP1Q8WWC4 291 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 MIEF2Q96C03 454 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 CNDP1Q96KN2 507 aa25.24■■□□□ 1.63
NPHP3-202ENST00000383282 ZNF282Q9UDV7 671 aaPredicted RBP25.24■■□□□ 1.63
NPHP3-202ENST00000383282 VAPBO95292 243 aa25.23■■□□□ 1.63
NPHP3-202ENST00000383282 EIF2S1P05198 315 aaKnown RBP25.23■■□□□ 1.63
NPHP3-202ENST00000383282 CMPK1P30085 196 aa25.23■■□□□ 1.63
NPHP3-202ENST00000383282 MUM1Q2TAK8 710 aa25.23■■□□□ 1.63
NPHP3-202ENST00000383282 CTSL3PQ5NE16 218 aa25.23■■□□□ 1.63
NPHP3-202ENST00000383282 FRMPD2BQ6IN97 320 aa25.23■■□□□ 1.63
NPHP3-202ENST00000383282 RNF44Q7L0R7 432 aa25.23■■□□□ 1.63
NPHP3-202ENST00000383282 ST6GALNAC3Q8NDV1 305 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms