RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ZNF460Q14592 562 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SYT16Q17RD7 645 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 UBE2UQ5VVX9 321 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SERPINA9Q86WD7 417 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TRMT10AQ8TBZ6 339 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 CPNE2Q96FN4 548 aaPredicted RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 OSBPL2Q9H1P3 480 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 FANCFQ9NPI8 374 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ZNF282Q9UDV7 671 aaPredicted RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 CPED1A4D0V7 1026 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ISPDA4D126 451 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 H3BUI4 141 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 M0R2N6 131 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 CLDN11O75508 207 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 RP2O75695 350 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 GABBR2O75899 941 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 GJB1P08034 283 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 AQP4P55087 323 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TSTQ16762 297 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 SLC25A52Q3SY17 297 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SLC51AQ86UW1 340 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PRELID2Q8N945 189 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 OR10G2Q8NGC3 310 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 RAB2BQ8WUD1 216 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 C12orf65Q9H3J6 166 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 CHRAC1Q9NRG0 131 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 A0A0J9YVX5 310 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 A0A1W2PPL8 197 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 HSBP1L1C9JCN9 74 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 HHLA1C9JL84 531 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 FGF19O95750 216 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 RAB36O95755 333 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PRNPP04156 253 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 JUNP05412 331 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 AGXTP21549 392 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SEMG2Q02383 582 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SSX2Q16385 188 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PARP15Q460N3 678 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 GPR157Q5UAW9 335 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 BBS12Q6ZW61 710 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SLC26A9Q7LBE3 791 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SLC22A16Q86VW1 577 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 MSL3Q8N5Y2 521 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 ALPK1Q96QP1 1244 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ARHGAP9Q9BRR9 750 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 B3GNT5Q9BYG0 378 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 B4DGG1 531 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 FARS2O95363 451 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 NFATC1O95644 943 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 GSTT2P0CG29 244 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PEPDP12955 493 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 VEGFAP15692 232 aaPredicted RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 TNFRSF8P28908 595 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 DGKEP52429 567 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 HNRNPKP61978 463 aaKnown RBP eCLIP5.74□□□□□ -1.49
RFX3-204ENST00000382004 MERTKQ12866 999 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 UBXN2BQ14CS0 331 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 SEC23BQ15437 767 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 NTRK3Q16288 839 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 LRRC38Q5VT99 294 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ABHD13Q7L211 337 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TIGD4Q8IY51 512 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TMEM156Q8N614 296 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 LNX1Q8TBB1 728 aaPredicted RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 BTN2A3PQ96KV6 586 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 FAM83DQ9H4H8 585 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PPP1R14DQ9NXH3 145 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ERVW-1Q9UQF0 538 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 CNTNAP1P78357 1384 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 A0A0G2JMP0 313 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 A0A0U1RQJ8 604 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 A0A1B0GVI7 797 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 H7C417 338 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 CDRT1O95170 752 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 NDST3O95803 873 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 GOT2P00505 430 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 ANXA3P12429 323 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ZNF35P13682 527 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PTNP21246 168 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 CRISP3P54108 245 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 KRBOX4Q5JUW0 171 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 NKAPLQ5M9Q1 402 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TRABD2AQ86V40 505 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 CNTD1Q8N815 330 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 OR4M2Q8NGB6 313 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 OR6N1Q8NGY5 312 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 OR5AK3PQ8NH89 298 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 OR5K1Q8NHB7 308 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 PNPLA2Q96AD5 504 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 S100A16Q96FQ6 103 aaKnown RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 COL21A1Q96P44 957 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TTPALQ9BTX7 342 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ZNF717Q9BY31 904 aaPredicted RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 PLEKHA3Q9HB20 300 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ANKHQ9HCJ1 492 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 LRRC4CQ9HCJ2 640 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 ZFP37Q9Y6Q3 630 aaPredicted RBP5.74□□□□□ -1.49
RFX3-204ENST00000382004 BLOC1S5-TXNDC5H3BN57 136 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 TULP2O00295 520 aa5.74□□□□□ -1.49
RFX3-204ENST00000382004 NUDT17P0C025 328 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms