RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 C12orf4Q9NQ89 552 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 FKBP14Q9NWM8 211 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 SAMHD1Q9Y3Z3 626 aaKnown RBP14.6□□□□□ -0.07
CTNS-202ENST00000381870 IPPQ9Y573 584 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 CCDC182A6NF36 153 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 FAM220BPB1ANY3 271 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 STX16O14662 325 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 ITGB1P05556 798 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 CCNYL3P0C7X3 344 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 PIRTP0C851 137 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 FPR1P21462 350 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 MYL9P24844 172 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 VLDLRP98155 873 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 HOXC5Q00444 222 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 SOX4Q06945 474 aaPredicted RBP14.6□□□□□ -0.07
CTNS-202ENST00000381870 CAMK2GQ13555 558 aaPredicted RBP14.6□□□□□ -0.07
CTNS-202ENST00000381870 TOR2AQ5JU69 321 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 GNASQ5JWF2 1037 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 NBPF12Q5TAG4 269 aaPredicted RBP14.6□□□□□ -0.07
CTNS-202ENST00000381870 KIAA1841Q6NSI8 718 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 VTCN1Q7Z7D3 282 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 AMIGO1Q86WK6 493 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 CALHM3Q86XJ0 350 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.6□□□□□ -0.07
CTNS-202ENST00000381870 DNAJC22Q8N4W6 341 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 ZNF557Q8N988 423 aaPredicted RBP14.6□□□□□ -0.07
CTNS-202ENST00000381870 PPP1R2P1Q96PQ5 205 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 ZBTB18Q99592 522 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 ABCB8Q9NUT2 735 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 MPP6Q9NZW5 540 aa14.6□□□□□ -0.07
CTNS-202ENST00000381870 NYNRINQ9P2P1 1898 aaKnown RBP14.6□□□□□ -0.07
CTNS-202ENST00000381870 CLCA1A8K7I4 914 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 B4DXG7 233 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 GJB3O75712 270 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 RECQL4O94761 1208 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 B3GALT4O96024 378 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 PGRP06401 933 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 MMP2P08253 660 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 ERP29P30040 261 aaKnown RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 RAD51Q06609 339 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 BTBD16Q32M84 506 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 LAX1Q8IWV1 398 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 FBXO16Q8IX29 292 aaPredicted RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 LINC01465Q8N7H1 131 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 CLHC1Q8NHS4 586 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 BLOC1S5Q8TDH9 187 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 SLC39A13Q96H72 371 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 TSEN34Q9BSV6 310 aaKnown RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 SYT17Q9BSW7 474 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 IL1RAPQ9NPH3 570 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 RAD18Q9NS91 495 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 ZNF490Q9ULM2 529 aaPredicted RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 CFL2Q9Y281 166 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 COL4A5P29400 1685 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 DOCK1Q14185 1865 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 LCHNA4D1U4 455 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 C1QCP02747 245 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 PSKH1P11801 424 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 IL1RNP18510 177 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 MLLT3P42568 568 aaPredicted RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 TAF6P49848 677 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 DOC2BQ14184 412 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 MRNIPQ6NTE8 343 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 MILR1Q7Z6M3 343 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 PLPP6Q8IY26 295 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 DTX3Q8N9I9 347 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 TRMT61AQ96FX7 289 aaKnown RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 GPR21Q99679 349 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 BARHL1Q9BZE3 327 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 DYRK4Q9NR20 520 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 HOXC10Q9NYD6 342 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 CD274Q9NZQ7 290 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 SPASTQ9UBP0 616 aa14.59□□□□□ -0.07
CTNS-202ENST00000381870 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
CTNS-202ENST00000381870 SMLR1H3BR10 107 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 SOCS7O14512 581 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 ARHGEF9O43307 516 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 KLK8O60259 260 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 PGK2P07205 417 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 FHP07954 510 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 SLC10A3P09131 477 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 POU3F3P20264 500 aaPredicted RBP14.58□□□□□ -0.07
CTNS-202ENST00000381870 PTGS2P35354 604 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 PIK3CGP48736 1102 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 TGM4P49221 684 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 PRIM2P49643 509 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 GZMKP49863 264 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 TSTQ16762 297 aaKnown RBP14.58□□□□□ -0.07
CTNS-202ENST00000381870 WSCD1Q658N2 575 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 TIGD7Q6NT04 549 aaPredicted RBP14.58□□□□□ -0.07
CTNS-202ENST00000381870 ZNF551Q7Z340 670 aaPredicted RBP14.58□□□□□ -0.07
CTNS-202ENST00000381870 TBC1D20Q96BZ9 403 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 OR5M11Q96RB7 305 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 OR52E6Q96RD3 313 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 ZNF382Q96SR6 550 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 SRRQ9GZT4 340 aa14.58□□□□□ -0.07
CTNS-202ENST00000381870 C11orf54Q9H0W9 315 aaPredicted RBP14.58□□□□□ -0.07
CTNS-202ENST00000381870 AS3MTQ9HBK9 375 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms