RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ZNF304Q9HCX3 659 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 ENAMQ9NRM1 1142 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 PIH1D1Q9NWS0 290 aaKnown RBP15.3■□□□□ 0.04
VCX3A-201ENST00000381089 MAU2Q9Y6X3 613 aa15.3■□□□□ 0.04
VCX3A-201ENST00000381089 CSMD1Q96PZ7 3565 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 TRAV17A0A0B4J275 112 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 HYKKA2RU49 373 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 ERI2A8K979 691 aaKnown RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 RASGRF2O14827 1237 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 OR1I1O60431 355 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 METTL18O95568 372 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 MYBL2P10244 700 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 ERVK-10P10266 1014 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 CXCR2P25025 360 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 CCR7P32248 378 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 VSX2P58304 361 aaPredicted RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 ART3Q13508 389 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 NAA25Q14CX7 972 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 CCDC38Q502W7 563 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 FASTKD1Q53R41 847 aaKnown RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 AARS2Q5JTZ9 985 aaKnown RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 MTFR2Q6P444 385 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 MICALCLQ6ZW33 695 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 HDAC10Q969S8 669 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 RELTQ969Z4 430 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 RAD51AP1Q96B01 352 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 ZNF285Q96NJ3 590 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 CARD6Q9BX69 1037 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 UNKQ9C0B0 810 aaKnown RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 ANAPC5Q9UJX4 755 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 C3orf18Q9UK00 162 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 TFR2Q9UP52 801 aa15.29■□□□□ 0.04
VCX3A-201ENST00000381089 KLF2Q9Y5W3 355 aaPredicted RBP15.29■□□□□ 0.04
VCX3A-201ENST00000381089 NSG1A0A0A6YYJ2 146 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 SOWAHDA6NJG2 315 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 GOT2P00505 430 aaKnown RBP15.28■□□□□ 0.04
VCX3A-201ENST00000381089 ZGLP1P0C6A0 271 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 PRF1P14222 555 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 AP2B1P63010 937 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 PRAMEP78395 509 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 KLC1Q07866 573 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 MUM1Q2TAK8 710 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 WASHC2DQ5SRD0 308 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 CNSTQ6PJW8 725 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 GFRALQ6UXV0 394 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 PPP1R21Q6ZMI0 780 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 LMNTD1Q8N9Z9 388 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 CATSPER1Q8NEC5 780 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 OR6P1Q8NGX9 317 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 OR4L1Q8NH43 312 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 STT3BQ8TCJ2 826 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 NR4A3Q92570 626 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 IL17FQ96PD4 163 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 BAG1Q99933 345 aaPredicted RBP15.28■□□□□ 0.04
VCX3A-201ENST00000381089 MENTQ9BUN1 341 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 CIDEBQ9UHD4 219 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 RIMKLBQ9ULI2 386 aa15.28■□□□□ 0.04
VCX3A-201ENST00000381089 MRPS2Q9Y399 296 aaKnown RBP15.28■□□□□ 0.04
VCX3A-201ENST00000381089 PCDH17O14917 1159 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 GPC4O75487 556 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 KLHL18O94889 574 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 FBLP22087 321 aaKnown RBP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 Q0VFX4 171 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 ZXDCQ2QGD7 858 aaPredicted RBP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 NDUFAF7Q7L592 441 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 VRK3Q8IV63 474 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 PRSS58Q8IYP2 241 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 UBL4BQ8N7F7 174 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 OR52K1Q8NGK4 314 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 OR13J1Q8NGT2 312 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 SUN3Q8TAQ9 357 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 MAGEC3Q8TD91 643 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 SKA2Q8WVK7 121 aaPredicted RBP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 FOPNLQ96NB1 174 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 PANX3Q96QZ0 392 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 CHST11Q9NPF2 352 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 PTGFRNQ9P2B2 879 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 ZC3H7BQ9UGR2 993 aaKnown RBP15.27■□□□□ 0.04
VCX3A-201ENST00000381089 CDC14AQ9UNH5 594 aa15.27■□□□□ 0.04
VCX3A-201ENST00000381089 APCP25054 2843 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 TRGV8A0A0C4DH27 118 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 A0A0J9YVX5 310 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 E7EVH7 732 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 KPNA5O15131 536 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 WFS1O76024 890 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 SLCO2B1O94956 709 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 CRYABP02511 175 aaKnown RBP15.26■□□□□ 0.03
VCX3A-201ENST00000381089 EIF2S1P05198 315 aaKnown RBP15.26■□□□□ 0.03
VCX3A-201ENST00000381089 ADRA1DP25100 572 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 PTGER4P35408 488 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 CCNFP41002 786 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 TNFSF10P50591 281 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 RIPPLY3P57055 190 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 KCNK10P57789 538 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 RBPJQ06330 500 aa15.26■□□□□ 0.03
VCX3A-201ENST00000381089 GRB7Q14451 532 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms