RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CYP4F3Q08477 520 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 XKR6Q5GH73 641 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 TMTC4Q5T4D3 741 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 WDR20Q8TBZ3 569 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 ZFYVE19Q96K21 471 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 HHIPQ96QV1 700 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 CENPKQ9BS16 269 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 THAP10Q9P2Z0 257 aaPredicted RBP22.43■■□□□ 1.18
VPS16-201ENST00000380443 EPOPA6NHQ4 379 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 HLA-EP13747 358 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 PSMC3P17980 439 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 PRPS1L1P21108 318 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 HRH2P25021 359 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 POLE2P56282 527 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 C21orf58P58505 322 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 FCHO2Q0JRZ9 810 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 NAE1Q13564 534 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 ATP6AP1Q15904 470 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 RAET1GQ6H3X3 334 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 NUDT18Q6ZVK8 323 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 ZNF583Q96ND8 569 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 ZNF696Q9H7X3 374 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 VAPAQ9P0L0 249 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 VPS29Q9UBQ0 182 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.43■■□□□ 1.18
VPS16-201ENST00000380443 PCDHGA11Q9Y5H2 935 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 KIF26AQ9ULI4 1882 aaPredicted RBP22.42■■□□□ 1.18
VPS16-201ENST00000380443 TBC1D3BA6NDS4 549 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 NPC1O15118 1278 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 PRAMEF4O60810 478 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 LILRB5O75023 590 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 FAM58BPP0C7Q3 252 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 MTHFD1P11586 935 aaKnown RBP22.42■■□□□ 1.18
VPS16-201ENST00000380443 FOSL2P15408 326 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 CCT8P50990 548 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 OR4D2P58180 307 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 SRSF11Q05519 484 aaKnown RBP22.42■■□□□ 1.18
VPS16-201ENST00000380443 PRAMEF9Q5VWM5 478 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 NOXRED1Q6NXP6 359 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 TMEM132CQ8N3T6 1108 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 KRTCAP2Q8N6L1 136 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 OR2T12Q8NG77 320 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 CXorf40AQ8TE69 158 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 REPS1Q96D71 796 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 PKP4Q99569 1192 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 DPEP2Q9H4A9 486 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 RPF2Q9H7B2 306 aaKnown RBP22.42■■□□□ 1.18
VPS16-201ENST00000380443 SPATA6Q9NWH7 488 aaPredicted RBP22.42■■□□□ 1.18
VPS16-201ENST00000380443 NDUFA13Q9P0J0 144 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 PADI4Q9UM07 663 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 RUVBL1Q9Y265 456 aaKnown RBP22.42■■□□□ 1.18
VPS16-201ENST00000380443 DLGAP4Q9Y2H0 992 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 NEUROG3Q9Y4Z2 214 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 KCNE2Q9Y6J6 123 aa22.42■■□□□ 1.18
VPS16-201ENST00000380443 TRBV5-3A0A0A0MS03 114 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 OTOL1A6NHN0 477 aaPredicted RBP22.41■■□□□ 1.18
VPS16-201ENST00000380443 RFXAPO00287 272 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 DFNA5O60443 496 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 MYO1DO94832 1006 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 SCELO95171 688 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 C1orf105O95561 183 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 SDC1P18827 310 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 FCARP24071 287 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 IMPA1P29218 277 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 PREPP48147 710 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 NEK2P51955 445 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 MTPNP58546 118 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 RUNX3Q13761 415 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 DOC2AQ14183 400 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 SPRED1Q7Z699 444 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 RIMKLAQ8IXN7 391 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 CIB1Q99828 191 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 THUMPD3Q9BV44 507 aaKnown RBP22.41■■□□□ 1.18
VPS16-201ENST00000380443 UGT2B28Q9BY64 529 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 TRIM8Q9BZR9 551 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 ITM2CQ9NQX7 267 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 LMCD1Q9NZU5 365 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 DENND4AQ7Z401 1863 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 C7orf72A4D263 438 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 LDLRP01130 860 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 IGFBP4P22692 258 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 MESP2Q0VG99 397 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 C6orf52Q5T4I8 152 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 CAPN13Q6MZZ7 669 aaPredicted RBP22.41■■□□□ 1.18
VPS16-201ENST00000380443 GET4Q7L5D6 327 aaPredicted RBP22.41■■□□□ 1.18
VPS16-201ENST00000380443 RALGPS2Q86X27 583 aaPredicted RBP22.41■■□□□ 1.18
VPS16-201ENST00000380443 SLC29A1Q99808 456 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 BDH2Q9BUT1 245 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 UBAP1Q9NZ09 502 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 CDH7Q9ULB5 785 aa22.41■■□□□ 1.18
VPS16-201ENST00000380443 KIAA1549LQ6ZVL6 1849 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 GSTA4O15217 222 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 MMP20O60882 483 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 NCK1P16333 377 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 OXTRP30559 389 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 OPRD1P41143 372 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 TRPC1P48995 793 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 SELPLGQ14242 412 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 NRF1Q16656 503 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 AAK1Q2M2I8 961 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms